Gossypium raimondii: 105793905
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Entry
105793905 CDS
T04129
Name
(RefSeq) U3 snoRNP-associated protein-like EMB2271
KO
K14793
ribosomal RNA-processing protein 9
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gra03009
]
105793905
Ribosome biogenesis [BR:
gra03009
]
Eukaryotic type
90S particles
Other 90S particles
105793905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
NBCH_WD40
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_DCAF12
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_IFT140_1st
WD_LRWD1
VPS8_N
Beta-prop_EIPR1
SMC_ScpA
Motif
Other DBs
NCBI-GeneID:
105793905
NCBI-ProteinID:
XP_012478260
UniProt:
A0A0D2NB41
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Position
3:23951011..23956971
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AA seq
506 aa
AA seq
DB search
MKSKNEKKRGTSATKGGLKEKKFSLKNDPFFETESKKRRKMDYEDDNIESGDSEEEAEIL
GASDGNGGEDEDENEIEETPGEIRKRVATELLGKMRAIARKEKEGRDGDEEVEEEEARDS
LVAKILQQEQLEESGRIKRVVASRLKKPETADGFRVMVKHRHTVTAVALSDDDLKGFSAS
KDGTILQWDVESGKTERYQWPSEDILKSHGAKDPRGRLKKHSKSVLALAVSSDGRYLASG
GLDRHVHLWDIRTREHLQAFSGHQKPVSCLSFRQGTTDLFSGSFDRTIKYWNMEDRAYID
TICGHESEVLTLDCLRKERVLTVGRDRCMMLFKVLDQSRLVFRPPPTSLECCCFINNDEF
LSGSDDGSIQLWNVLRKKPVYIVKNAHALLPAGQNVEQKENGDHKIEGYNFSSTYSWVSS
ISVCRGSDLAASGAGNGCVRLWAIETGRKDIQPLYDVPLMGFVNSLAFAKSGQFLVAGVG
QEPRLGRWGRLPTARNGVAIQPLKLL
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcaagaatgagaagaagcgggggacgtcggccacaaaaggaggcctaaaggag
aagaaattttcgctgaaaaatgatccctttttcgagacggagagtaagaagcggcggaaa
atggactacgaggatgataacattgagtcaggggattctgaagaggaggcggagattctg
ggggcttctgacggaaacggcggagaggatgaggatgagaatgagattgaggagactcct
ggtgagattcggaaaagagtggcgacggagcttttgggtaagatgagggcaatagcaagg
aaggagaaagagggcagggatggggacgaggaagtggaagaagaagaggctagggattcg
cttgtggccaagattttgcagcaggaacagcttgaggagagtggcaggattaagagagtc
gttgcttccaggcttaaaaagccagaaactgctgatggatttagagtcatggtgaagcat
cgacacactgttactgctgtagctctatctgatgatgacttgaagggcttctcagcgtcc
aaagacggtactattttacagtgggatgtagaaagtgggaagacagaaaggtaccaatgg
cctagtgaagatattcttaaaagtcacggggccaaggatccaaggggtcgccttaaaaag
catagtaaaagtgtattagccttggctgttagttcagatggccggtatttggctagtgga
ggcttagaccgccatgttcatctatgggatattcgtacaagagagcatttacaggcattc
tcaggtcatcaaaagcctgtgtcatgtttaagttttaggcaaggtaccacagatcttttt
tctggatcgtttgatcgaacaatcaagtattggaacatggaagaccgagcttacattgac
acaatatgtggtcatgaaagtgaagtgttgacccttgattgcctaaggaaagaacgagta
ttgacagttggccgtgatcgatgtatgatgttgtttaaggttcttgaccagtctcgattg
gtttttcgtcctccaccaacatctttggagtgctgctgctttattaacaatgatgaattc
ttatctggctcggacgatgggagtattcaactttggaacgtattaagaaagaaacctgta
tacattgtgaagaatgctcatgctctgctgcctgctggccaaaatgttgaacaaaaagaa
aatggtgatcataaaattgagggctataatttttcatcaacatattcatgggttagttca
atcagtgtatgtcgaggcagtgaccttgctgcatcaggagctggtaatggttgtgttcga
ttatgggccattgagactggcagaaaagacatccagcctttatatgacgttccattgatg
ggatttgttaattccctggcttttgcgaaatctggacagttcctagttgcgggagttggg
caggaaccccgacttggaagatggggacgccttccaactgctcggaatggagttgcaatt
cagcccttgaagctcttgtaa
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