Gossypium raimondii: 105794018
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Entry
105794018 CDS
T04129
Name
(RefSeq) fanconi-associated nuclease 1 homolog isoform X1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
gra
Gossypium raimondii
Pathway
gra03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
105794018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gra03400
]
105794018
Enzymes [BR:
gra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
105794018
DNA repair and recombination proteins [BR:
gra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
105794018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
FAN1_HTH
FAN1_TPR
HIRAN
Sgf11
DNA_ligase_ZBD
Motif
Other DBs
NCBI-GeneID:
105794018
NCBI-ProteinID:
XP_012478430
UniProt:
A0A0D2RDZ6
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All DBs
Position
3:complement(29102088..29111620)
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AA seq
951 aa
AA seq
DB search
MLTGRESLSRLIGKRRRFLPNLQSILSSPIRSSLNLLSDENGRLTETESSKGKVEISSSD
LVTCPVCGSKVRGEDYTINSHLDRCLSRRTKRKLTQRTLLELNFGCSQSKLQISSDESEQ
LLSSDLSKNCSDYEENVTRCFSKIDPREEKSHDQRRQLPHTESVKQIDVAGSAENPISDG
RANTMVDFSALSTDNEESRNHIDVTVDSISGMAIDTYIVGRKFSDEKEVNLGANISLLRD
PDNIKDSNAIKVLSASSACCKVLGYLPLELAQYLSPLIEKYCLSFEGYVISVPKRSLDAV
QIQIVCQNSIFNGKKGYDEFEALHLWQKALQVVEFAKNRPPNTTKYQQNFCLLLKEVLTS
SPHLFTKDKKKFIESFTSLSEDSQRLFVRLYTRKGPWFRLSTIMYPEICNPQQAVKELSA
TGYLYLFEDTTKLHDDEMKDLLSLLTVSELRDILCTLRKKCNQGSRKQNLIASLLSCYKG
GSCPVLQRLILERTEICIRTSPEAESLFWRAERLFFLNGEQDLSAFLLVDLGIVKYPTYN
CIILEQIFSNESDLLAYEEAIEVAQVIDQSLDENNFELVLRCIMIADSRISCCPEKLIDS
TSPDLMAIFRSCFSASWVYSKVILLGISFLECERRYKDAIHLLRRLLDCFTCDTRRGYWT
VRLSVDLEHIGCPNESLSVAEAGLLDPWVRAGSRMALQRRVLRLAKPPRRWKTPSFSVTL
KRKIIEVHIQGRPLNCEAGRKSRFYGEDGEQCGVEQLALQYYAREGGWQGVHTESGIWMT
IFGLLMWDVLLSDVPNVFRTRFQTAPLDMETDHFYLARKSLIEPQLQKIHDGLAEEILIT
SWELHMGTACRGVNWDQHSLSDLRAAVSCIRGPCLASLCRHLAQDYGSWSSGMPDLLLWR
FHGDYKGEAKLVEVKGPRDQLSEQQRAWLLLLMDCGFNAEVCKVSTTGTSP
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgctaactggaagagaaagtttaagcagattgatcggcaagcgccgccgttttcttccc
aaccttcaatctattctctcttcgcctatccggagctctttgaatctattgtctgatgaa
aatggacgtttgactgaaactgaatcttccaaaggcaaagttgaaatatccagttctgat
ttggtaacttgccctgtttgtgggagcaaagttcgtggtgaagattacactatcaattct
catctggatagatgtctttctagaagaaccaagcggaagctgacacagcggacacttctt
gaattaaactttggttgttctcaatcaaagcttcaaatttcctcggatgaatcagaacag
ctgctgagtagtgaccttagtaagaattgttctgactatgaagagaatgtcactcgttgc
ttctcgaagattgatccaagagaagaaaaaagccatgatcagcgcagacaattgccgcat
actgagagtgttaaacaaattgatgtggctggttcagcagaaaatccgatcagtgatgga
agggcaaacaccatggttgacttttctgcattgtccactgataatgaggagtccagaaat
catatagatgtaactgtggacagcatatctgggatggctattgatacttatattgtcggt
cgtaagtttagtgatgaaaaagaggtgaatctaggggcaaacatatctcttctgagagac
cctgataatattaaggattcaaatgctatcaaggttctttctgcaagttctgcatgctgt
aaggtgcttggttatctccctctagagttagctcagtatttatctcctctgattgaaaag
tactgcttgagctttgagggatatgtgatatctgttcctaaacgttctcttgatgctgtt
caaattcagattgtgtgtcagaacagtatatttaatggtaaaaaaggatatgatgaattt
gaggctttacatttgtggcaaaaagctcttcaagtagttgaatttgcaaagaaccgccca
cctaatacgacaaaatatcagcaaaatttttgtctgttactaaaggaggttctaactagt
agccctcaccttttcacaaaagataagaagaaattcatcgaatcattcacttcattatca
gaggatagtcagaggctttttgttcgactttatacacggaaaggaccttggtttcgattg
tctaccattatgtaccctgaaatatgtaatcctcaacaagctgtcaaggagctgtctgca
actggctatctgtatctctttgaagatacaactaaactacatgatgatgaaatgaaggac
cttttgagtctgctcactgtttctgagcttcgtgacattttatgtacactaagaaagaaa
tgtaatcaaggttcaagaaagcaaaatcttattgcatctcttctttcctgctataaaggt
ggatcatgccctgttctacaacggttaattttggagagaactgagatttgtattaggaca
tctccagaagctgaatcccttttttggcgtgctgagaggcttttcttcctaaatggagaa
caggatctgtcggcattcctactggtggatctcgggattgtcaagtatcctacttacaac
tgcataattttagaacagattttctcgaatgaaagtgacttacttgcatatgaagaggcc
attgaagtggctcaagtaattgatcagtctcttgatgaaaacaactttgagttggtttta
agatgcatcatgatagctgattcccgtatatcctgctgtcccgagaaattgattgattcc
acaagccctgatttaatggctatatttcggtcatgcttctcagcatcatgggtgtattct
aaagtaatcttgcttggaatttccttccttgagtgtgagcgtaggtacaaggatgcgata
catttactaaggcgattgcttgattgcttcacctgtgatacaagaaggggatattggacc
gtaagattatctgttgatttggagcacattggctgccccaatgagagtctttcagtcgct
gaggctggattattagatccttgggttcgtgccggttcaagaatggcactacaaaggcga
gttcttcgcttggcaaaaccacctaggcgctggaaaactccaagcttttcagtaactctt
aagaggaagataatagaggttcatattcaagggagaccattgaactgtgaagctggtaga
aaaagccggttctatggggaagatggggagcaatgtggagtagaacagttagctctacag
tattatgcaagagaaggtggatggcagggtgtccatacagagagtggtatatggatgact
atctttgggcttctcatgtgggatgttttactttcagatgtaccaaatgttttccgcacc
agattccagactgctccattggatatggagactgatcatttttatctggcaagaaagagc
cttatcgagccccaactacaaaaaatccacgatggtttggctgaagagattctcataaca
tcatgggaattgcatatgggaacagcttgtagaggagttaattgggaccaacactccctt
tccgaccttcgagcagctgtttcatgtatcagaggtccttgtttggcctctctatgtaga
catctcgctcaggattacggtagttggtcgagtggaatgcccgatttgttgctctggcgg
ttccatggggattacaaaggtgaagccaaactcgtcgaggttaagggccctagagatcaa
ctctccgaacaacaaagagcatggcttctacttctaatggattgtggattcaacgcggag
gtttgtaaagtgagcactacaggaacatccccttga
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