Gossypium raimondii: 105794170
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Entry
105794170 CDS
T04129
Name
(RefSeq) alpha-amylase 3, chloroplastic
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
gra
Gossypium raimondii
Pathway
gra00500
Starch and sucrose metabolism
gra01100
Metabolic pathways
gra01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
105794170
Enzymes [BR:
gra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
105794170
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Gene cluster
GFIT
Motif
Pfam:
Ig_N_CWD1
Alpha-amyl_C2
Alpha-amylase
DUF5089
Glyco_hydro_70
GULLO2-like_3rd
Motif
Other DBs
NCBI-GeneID:
105794170
NCBI-ProteinID:
XP_012478653
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All DBs
Position
3:35839056..35851972
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AA seq
877 aa
AA seq
DB search
MATLAIGSLLQNPRLSSPRGQKLLLNLKPLHSLDLDCSPHRKLLCSRGACFSNSNPCGKF
HIVKASSTDTAPIDTFSSADILYEQTFPVNRIEKVEGKLLIRLDQSKEQLNWRLTIGCSL
SGKWILHWGVSYVGDTGSEWDQPPKDMWPHGSIPIKDYAIETPFKKPSKDDTFHEVKIDF
NPSSAIEAIHFILKDEETGASYQHKGRDFRVSLVNYLEDDGNMIHTKRSFGKWPDAVEQL
PNMVLKAEASCDSKNENRRLEGFYEEQPIVKEVSVGNMVNVAIRKFPDAANIVLHLETDI
PGDVVVHWGVCRDDAKTWEISAVPYPPETTVFRNKALRTLLQPTGNGSRALFTLDEKLDG
FLFVLKLDANSWVNFQGNDFYIPLSSARSVKGQSDSESEETSGKAHTDGIINEIRNLVSG
LNSEKSLQTKVKEAKESILNEIEKLAAEAYSIFRSSTPSYPEEDSDADDAEPTINISSGT
GSGFEILCQGFNWESNKSGRWYMELKEKASEISSLGFTVIWLPPPTESVSPEGYLPKDLY
NLNSRYGTIDELKDLVKSLHGVGLKVLGDVVLNHRCAHYQNQNGVWNIFGGRLNWDDRAV
VGDDPHFQGRGNKSSGDNFHAAPNIDHSQDFVRKDLIEWLCWLREEIGYDGWRLDFVRGF
WGGYVKDYLDASEPYFAVGEYWDSLSYTYGEMDHNQDAHRQRIVDWINATNGTAGAFDVT
TKGILHSALERREYWRLSDQKGKPPGVVGWWPSRAVTFIENHDTGSTQGHWRFPGGKEMQ
GYAYILTHPGTPAVFYDHIVSHHRSEIGALISLRNRNKIHCRSIVEIVKAERDVYAATID
DRVAMKIGPGYYEPPSGPQRWSLALEGYDYKVWEASS
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggccacccttgccatcggttcccttctccaaaaccctaggctatcgtctcctcgcgga
caaaagttgttgttaaacttaaagcctcttcactcattggatttggattgttctccacat
agaaagcttctctgctctcgtggtgcttgcttctctaactccaacccttgcgggaagttt
catatcgttaaagccagctcaactgatacagctcccattgacaccttttcttccgctgac
atcttgtacgaacaaacttttcccgtcaaccgaattgaaaaggtggagggaaaactgttg
atcaggttggatcaatcaaaggaacagctgaattggcgacttacaataggatgtagtctt
tcaggaaagtggattcttcattggggagtctcttatgttggtgatactggcagtgaatgg
gatcaacctcctaaagacatgtggcctcatggttcaattcccattaaagactatgcaatt
gagacgcccttcaagaagccgtctaaagatgatacatttcatgaagtaaagatagatttt
aatcccagcagtgcgattgaagctatacattttatcctcaaggatgaagaaactggagcc
tcgtatcagcacaaaggtcgagattttcgggtgtctcttgtgaattacctcgaggatgat
ggcaatatgattcacacgaaacgcagctttggcaaatggccagatgctgtggagcaactc
cctaacatggtacttaaagcagaagcatcatgtgactctaaaaatgagaacaggcgactt
gaagggttctatgaagagcagcccattgtaaaagaagtttctgtcggtaacatggtcaat
gttgcaattaggaagttccctgatgcagcaaatattgttctacatttagaaactgacata
cctggagatgttgtagttcactggggagtttgcagagatgatgctaaaacatgggaaata
tctgctgtaccatatccacctgaaacaactgtgttcaggaacaaggctttacgcacctta
ttgcagccaacaggaaatggatcaagggcattgttcactttagatgaaaaacttgatgga
tttctttttgttctaaagctggatgctaacagttgggtgaactttcaaggaaatgacttc
tatattcccctctctagtgccagaagtgttaagggtcaatctgatagtgaaagtgaagaa
acttctggtaaagctcatactgatggtataatcaatgagatacggaacttggtcagcggc
cttaactctgagaagagtttgcagactaaagtaaaggaagcaaaagaaagcattcttaat
gaaattgaaaagctagccgctgaagcctatagcatcttccggagctccactccatcctat
ccagaggaagattcggatgctgatgatgcagaacccactattaacatatcctctggaaca
ggctcaggttttgaaatattgtgccaaggtttcaactgggaatctaataaatctggacga
tggtatatggaactcaaagaaaaagcttctgaaatatcttcacttgggtttactgtgatt
tggctgccaccaccaaccgagtctgtgtcacctgaaggttacttgccgaaggacttgtat
aatttaaattccaggtatggaacaatcgatgagctgaaggacctcgtaaaaagcctccat
ggagttggtttgaaagttcttggtgatgttgtattgaatcaccgttgtgcacactatcaa
aatcagaatggtgtttggaatatatttgggggtcgcttgaattgggatgatcgtgcagta
gttggagatgatcctcattttcagggcaggggtaacaaaagcagtggagataatttccat
gctgctccaaacattgatcattcacaagatttcgtaaggaaggatctcatagagtggcta
tgctggctaagagaagaaattgggtatgatgggtggaggctggattttgtcagaggattt
tggggtggttatgtcaaggactacttggatgcaagtgaaccatacttcgcggtgggtgag
tattgggattctctcagttacacatatggtgaaatggaccacaatcaagatgcccaccga
cagagaattgtcgactggatcaatgctactaacggaactgccggtgcatttgatgtcaca
actaagggaattcttcattcggcactggaaagacgtgaatattggcgattatcggatcag
aaagggaagcctcctggggttgttggatggtggccctctcgtgctgttacctttatagag
aatcatgacactggttctacccagggtcattggaggtttccaggtggaaaggaaatgcaa
ggatatgcatatatcttgacacacccaggaacaccggctgtgttttatgatcacattgtc
tcccaccatcgctcagagattggtgctcttatctctctcagaaacagaaacaaaatccat
tgccggagtatagttgaaattgtgaaggcagagagggatgtatatgcggccaccatagac
gacagagttgcaatgaagattggaccaggttattatgagcctccaagtggaccccaaaga
tggtccttagctcttgagggatacgattacaaggtctgggaagcatcttcttaa
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