Gossypium raimondii: 105794376
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Entry
105794376 CDS
T04129
Name
(RefSeq) protein CHROMATIN REMODELING 19 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gra03036
]
105794376
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
105794376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
ResIII
SWI2_SNF2
VGPC1_C
Motif
Other DBs
NCBI-GeneID:
105794376
NCBI-ProteinID:
XP_012478986
LinkDB
All DBs
Position
3:complement(44527360..44534505)
Genome browser
AA seq
750 aa
AA seq
DB search
MKRVFEEISDEEWENHSFKPSRVLKKNPNPPPIESFAFNSQTQASFSDQSSDDCVEIEHL
ADDSNLEDDVEPEDAGPVNLARRFIVDEDDDDEEDGDGKDGNENAFEELYDIESSEEEQL
QEDDVVGKALQKCAKISAELRKELYGSSGASCERYAEVEASSVRIVTQNDIDAACAVVDP
EFQPVLKPYQLVGVNFLLLLHSKGIGGGNGCSFFFMMPCTMLIAILADEMGLGKTIQAIT
YLTLLKHLKNDPGPHLIVCPASLLENWERELKKWCPSFSVLQYHGAGRASYSKELGYLSK
AGLPPPFNVLLVCYSLFERHSVQQKDDRKILKRWKWSCVLMDEAHALKDKNSYRWKNLMS
VARNAKQRLMLTGTPLQNDLHELWSLLEFMMPDLFATEYVDLKKLLNAEDRELIGRMKSI
LGPFILRRLKSDVMQQLVPKIQQVEYVIMEKHQENAYREAIEEYRTISRARIAKLSEPDL
NNIIGVIPRRQISNYFVQFRKIANHPLLVRRIYDDDDVGRFAKRLHSIGVFECTLDRVVE
ELKNYSDFSIHQLLLRYGITGGKGTLSDEHVMLSAKCQALAELLPSLKRSGHRVLIFSQW
TSMLDILEWTLDVIGVTYRRLDGSTQVTDRQTIVDDFNNDTSIFACLLSTRAGGQGLNLT
GADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLTLDA
AVLESGLDVGNEDDTSEKTMGQILSSLLMS
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgttttcgaggaaatctctgacgaagaatgggagaaccactctttcaagcct
tctcgtgttttgaagaaaaaccctaatcctcctccaattgagtctttcgctttcaattcc
caaactcaggctagtttttccgaccaaagcagcgatgattgtgtcgaaatcgaacatttg
gctgatgattccaacttggaagacgacgttgagcccgaggatgccgggccggtcaacctt
gcgcgtcgattcatcgttgatgaagacgatgacgacgaagaagatggtgatggaaaagac
ggcaatgagaatgcttttgaggagctgtatgacattgagtcgagtgaagaagagcaattg
caagaggatgacgtggtggggaaggcgttgcagaagtgtgcgaaaatatctgcggagcta
cggaaggagctgtatgggagttccggtgcttcttgcgaacgatacgccgaagtagaagct
tcttcagtgagaatcgttacacagaatgatattgatgcagcatgtgcagtggtggatccg
gaatttcagccagttctcaagccatatcaactggttggtgtaaattttcttcttctgttg
catagtaagggcattggtggagggaatggttgttcatttttctttatgatgccatgtact
atgttaatagctatattggcagatgagatgggtcttgggaaaaccattcaggctattaca
tatctgactttgctgaaacatctgaaaaatgatcctggtcctcatttaatagtttgtcct
gcctcacttttggaaaactgggaaagagaacttaagaagtggtgcccctcattttctgta
cttcagtatcatggtgctggccgagcatcttattcaaaagagttgggttatttgtccaaa
gctggattgccacctccatttaatgttcttcttgtgtgttattcactttttgaaagacac
agtgtgcagcagaaggatgaccgtaaaattctgaaacgatggaaatggagctgcgtgcta
atggatgaggcccatgctttgaaggacaagaacagctacaggtggaaaaatctaatgtca
gttgctcgaaatgcaaagcagcgtcttatgctaacaggcacaccactgcaaaatgattta
catgagctgtggtctttgctagagttcatgatgcccgacctttttgccactgagtatgta
gatctgaagaagctactaaatgcagaagatagggagctaattggtcgtatgaagtccatc
ttgggaccattcatcttgaggcgtttgaaatcagatgtgatgcagcagcttgtcccaaag
atacagcaggttgagtatgtgattatggaaaagcatcaagaaaatgcttatagggaagct
atagaagagtatcgtacaatttcacgagcacgcattgcaaagttatcagaacctgacttg
aataatatcattggggttattcctcggcgtcagatctctaactattttgttcagtttcgc
aagattgcaaatcatccattattagtgaggcgaatatatgatgatgatgatgttggtcgc
ttcgctaaaaggttacattctattggtgtttttgaatgtaccttggacagagtagttgag
gaattaaagaattacagtgacttctccattcatcagcttttacttcgttatggaattact
ggtggtaaaggaactctttctgatgaacatgttatgctttctgctaaatgccaggcatta
gcagagcttctcccttcactcaagagaagtgggcaccgtgttctgatttttagccagtgg
acatcaatgcttgatatcttagagtggactttagatgtgattggggttacatatagacgg
cttgatggaagcactcaggtgaccgataggcagactatagttgacgatttcaataatgac
acttctatatttgcgtgtctgttgtccacgagagctggagggcaaggtttgaacttaaca
ggagctgatactgtagttattcatgacatggattttaatccacagatagaccgacaggct
gaagatcgctgccatcgaattggccaaacaaggccagttaccatatacaggctggttacg
aaaggtacagttgatgagaatgtttatgagattgcaaaaaggaagttgactcttgatgca
gcggtgctagagtctggattggatgtaggcaatgaagatgacacatctgagaaaacaatg
gggcagatattatcatccctacttatgagctag
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