Gossypium raimondii: 105794520
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Entry
105794520 CDS
T04129
Name
(RefSeq) nuclear pore complex protein NUP54
KO
K14308
nuclear pore complex protein Nup54
Organism
gra
Gossypium raimondii
Pathway
gra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105794520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105794520
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105794520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Motif
Other DBs
NCBI-GeneID:
105794520
NCBI-ProteinID:
XP_012479166
UniProt:
A0A0D2PU93
LinkDB
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Position
3:48439068..48444123
Genome browser
AA seq
425 aa
AA seq
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MFGAQASTSAFGTPSSTPAFGTPSSTPAFGTTPSTPAFGAPSSTPAFGTPSSTPAFVTPS
STPAFGTPSSTPAFGAPSSTPAFGTPSSTPAFGTPSTPSFATGFGGSSLFSTPFSSQTQQ
QQQTSLFQQPQPSIAAPSSGFGFQTSLSATPFPNAQLTTQMAPVAPLPFSLADRDIQAIV
DAYKEEAGNPKYAFKHLLFSVIEPQFRGKAAGVSDIMWAEAMAKLEGMESSDRERLWPQL
VQGFKDLSQRLKLQDEVIVSDAERLRMTQSNVKMLQRHFQAETLPWIQRMRQKEQSLQRR
LLKMMRILEALEGKGCRVPLMKGEVELAEKLAAITRQLKGSGAELSRRVQNLLIVSRVQA
NAIGAGGSLYLPGSTKIHEQSLADMQEVLQQQTEAIARLGNVLKRDIRDMEIIMAEDTDM
TENVN
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgttcggagctcaagcttccacttctgccttcggcactccttcttccacccctgccttt
ggcactccttcttccaccccggcctttggaactactccttccactccggcttttggggct
ccttcttccacaccggcatttggcactccgtcttcgacaccggcgtttgtcactccttct
tcgacaccggcctttggcactccgtcttcgacacctgcgtttggggctccgtcttcgaca
ccggcgtttggaactccgtcctcgacaccggcttttggaactccatcaacgccgtctttc
gctacgggctttggcggctcctctcttttctccaccccattctcttctcaaacgcaacag
cagcaacagacttcattgtttcagcaaccacagccatccatcgcggcaccctctagtggt
ttcggattccagacttcgttatccgccactcctttccccaatgctcaattgacaactcaa
atggctcccgtggcccctctccccttctctctcgccgatcgtgacattcaagcgattgtg
gatgcttacaaagaggaggctgggaaccctaagtatgctttcaagcatttgttgtttagt
gtaattgaaccacagttcaggggaaaggcagctggtgtatcagatataatgtgggcagaa
gctatggcgaaactggagggtatggagagttctgatcgggaaagactctggcctcagctt
gttcagggttttaaggatctttcacagcggttgaagctacaagatgaagtcattgtttca
gatgctgagaggttgcgaatgacccagagcaatgtgaaaatgcttcagaggcattttcaa
gctgaaactcttccatggatccagagaatgagacaaaaggagcaaagcctccaaagacgg
ctcttaaagatgatgagaatactggaagcattagaaggtaagggttgccgtgtgccttta
atgaaaggggaagttgaattggctgagaagttggctgcaataactagacagttgaaagga
tctggagccgaactttctaggagggttcaaaacctgctaatcgtatctcgtgttcaagca
aatgctattggtgctggaggttctctttatcttccaggatcaactaaaatacatgagcag
agtcttgccgatatgcaggaggtattacaacagcaaacagaggccattgcaaggcttggc
aacgttttgaagcgagatatcagggatatggagataataatggctgaagacacggatatg
acggaaaatgtgaattag
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