Gossypium raimondii: 105794575
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Entry
105794575 CDS
T04129
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gra
Gossypium raimondii
Pathway
gra00040
Pentose and glucuronate interconversions
gra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105794575
Enzymes [BR:
gra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
105794575
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
105794575
NCBI-ProteinID:
XP_012479280
UniProt:
A0A0D2RN10
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Position
3:49824131..49825965
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AA seq
406 aa
AA seq
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MAIPLSFFLLLFPLLAPTFVLSSPVQDPEQVVQQVNESIRNATMARRSLGFLSCGTGNPI
DDCWRCDHHWEKNRQKLADCAIGFGKHAIGGRDGKIYVVTDPSDHDPVNPKPGTLRYAVI
QDEPLWIIFARDMTIKLKEELLMNSFKTIDGRGVSVHISGGPCITVQYVTNIIIHGINIH
DCKRGGNAYVRDSPTHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAI
TISNNYLTHHNKVMLLGHSDTYKQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY
THWEMYAIGGSADPTINSQGNRFLAPNDADNKEVTKHEDAPQSQWKHWNWRSEGDLMLNG
AFFTASGTGASSSYAKASSLGARPSSLVSSLTAGAGALVCKKGSHC
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcccattgtccttctttctactgcttttccctctcttggctcccacatttgtt
ctctcctcaccagttcaggaccccgagcaagtagtccaacaagtcaatgagagcataaga
aatgctactatggcgaggaggagcttggggtttctctcatgtggaaccggcaatcccatc
gatgattgctggcggtgcgaccatcattgggagaagaaccgtcagaagctagccgactgc
gccattgggttcggcaagcatgccattggtgggagagatgggaaaatatatgtggtgact
gaccctagtgaccatgaccctgttaatcctaaacccggaacccttcgatatgctgtcatc
caagatgaacctttatggatcattttcgctcgtgacatgaccatcaagttgaaggaagaa
ttgcttatgaactcgttcaagaccatcgacggccgaggcgtcagcgtccacatttccggt
gggccatgcattactgttcagtacgtgaccaacatcataatccatgggatcaacattcat
gattgcaagagaggagggaatgcttatgtgagggactctcctacccattacggctggagg
acgatatcggacggggacggggtatcgattttcggaggcagccatgtttgggtggaccat
tgctctttgtctaactgcaacgatgggctgatcgacgccattcatggatccaccgccatc
accatttctaacaattacttgacccatcataacaaggtcatgctattgggacatagtgac
acttacaaacaagataagaacatgcaagtcaccattgcctttaatcactttggagaaggc
cttgtacaaagaatgcctagatgtaggcatggatactttcacgtggtgaacaatgattac
acgcactgggaaatgtatgcaatcggtggcagtgctgatcctacaatcaacagccaaggc
aatagatttcttgcaccaaatgatgcagacaacaaagaggtgacaaaacatgaggatgcg
ccgcaaagtcaatggaagcattggaattggagatcagaaggggatttgatgttgaatgga
gccttcttcaccgcatccggaaccggggcttcttcaagttatgccaaggcgtcgagcttg
ggtgcgaggccgtcatcactggtgagctcactcacagcaggagcgggtgcactcgtttgc
aagaaggggtcgcattgctag
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