Gossypium raimondii: 105794667
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Entry
105794667 CDS
T04129
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
gra
Gossypium raimondii
Pathway
gra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105794667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gra03041
]
105794667
Spliceosome [BR:
gra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
105794667
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
105794667
NCBI-ProteinID:
XP_012479411
UniProt:
A0A0D2SJC5
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Position
3:complement(52502520..52505912)
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AA seq
485 aa
AA seq
DB search
MATLADSFLADLDELSDNEADVLEEENNDVANMEEDIDGDLADIETLNYDDLDSVSKLQK
SQRYIDIMQKVEDALEKGSDISNQGLVLEDDPEYQLIVDCNGLSVDIENEIVIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKP
LPEDVLQKTIDACDRALALDTAKKKVLDFVESRMGYIAPNLSTIVGSAVAAKLMGTAGGL
SALAKMPACNVQLLGAKKKTLAGFSTATSQFRVGYIEQTEIFQTTPPALRSRACRLLASK
ATLAARIDSTRGDPLGNAGKTLKEEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSIGQSKLAA
KVAKKFKEKNYGSSGATSGLTSSLAFTPVQGIELTNPQAHAHQLGSGTQSTYFSETGTFS
KIKRT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcaactttagctgattcattccttgcggaccttgatgaattatcagacaacgaagcc
gatgttctggaggaagaaaataatgatgttgcaaacatggaagaagatattgatggtgac
ctcgcggatatcgaaacgcttaactacgatgatctggacagtgtttccaaattgcaaaaa
agtcagagatacattgatataatgcagaaagtggaagatgcgctcgagaagggttctgat
atatcaaatcagggcttggtactggaagatgatcctgagtatcagctgattgtggactgt
aatggactatcagttgatatcgagaatgagattgttattatccataattttatacgtgat
aagtaccgattgaagtttcctgagcttgaatcgcttgtgcatcatccaattgattatgct
cgtgtggtgaaaaagattggcaatgagatggatttaacccttgtggatttggaagggctt
ttgccttcagctatcattatggttgtttcagttacagcatcaactaccagtggcaagcca
cttcctgaagatgttctccagaaaactattgatgcgtgtgatcgtgctctggctctggat
actgcaaagaagaaggttcttgattttgtagaaagtagaatgggatatattgcaccaaat
ctttctactattgttggaagtgctgttgctgctaaacttatgggtactgctggtggcctt
tcagcattagctaagatgcctgcttgtaatgttcagctgcttggtgcgaagaagaagacc
cttgcagggttttccactgcaacgtcacagtttcgtgttgggtatattgaacagacagag
atttttcaaactacaccccctgctttgaggagtcgtgcttgtcgtctcttggcttctaaa
gcaactcttgcagcacgtatagactccactagaggggatcctttggggaatgctggaaaa
accttaaaggaagaaattcataagaaaattgaaaaatggcaagaaccacctcctgcaaag
cagcctaaaccacttcctgttcctgattctgaacctaagaaaaagaggggtggtcgtcgc
ttaaggaagatgaaagaaaggtatgctataacagacatgaggaagctagcgaacaggatg
caatttggagtacctgaggaaagctctttaggtgatggactaggtgaaggttatggaatg
cttggtcaggctgggagtggcaaactgcgtgtttcaattggtcagagcaaacttgcagcc
aaagttgctaagaagttcaaggaaaagaattacggaagcagtggtgccacctctgggctg
acttcaagtttggcattcacacctgtgcaggggattgagctcacaaatcctcaagctcat
gcacatcagcttggcagtggaactcaaagtacttacttctcagagacaggaacattttca
aagatcaagaggacatag
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