Gossypium raimondii: 105794848
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Entry
105794848 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105794848 isoform X1
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gra03009
]
105794848
04121 Ubiquitin system [BR:
gra04121
]
105794848
Ribosome biogenesis [BR:
gra03009
]
Eukaryotic type
90S particles
Other 90S particles
105794848
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
105794848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Sof1
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF4
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
PROPPIN
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD40_RFWD3
eIF2A
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
Beta-prop_IP5PC_F
VID27
LuxS
Motif
Other DBs
NCBI-GeneID:
105794848
NCBI-ProteinID:
XP_012479662
UniProt:
A0A0D2PW75
LinkDB
All DBs
Position
3:56299401..56304401
Genome browser
AA seq
452 aa
AA seq
DB search
MKVKVISRSTDEFTRERSQDLQRVFRNFDPSLRSQEKAVEYVRALNAAKLDKIFARPFIG
AMDGHRDSIKCMAKNPNYLKAIFSGSDDGDIRLWDLASRRTVCQFPGHQGAVQGLTVSTD
GSILVSCGSDCTVRLWNVPDANLADSDILSDNSAKPVAVYVWKNAFRAVDHQWDGDLFAT
AGAQVDIWNHNRSQPVNTFDWGADTTISVRFNPGEPNILATSANDRSITLYDLRMSSPAR
KVIMRTKTNSIAWNPMEPMNFTAANEDCNCYSYDARKLEEAKCVHKDHVSAVMDIDFSPT
GREFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVFCVKYSCDASYVISGSDDTNLRLWK
AKASEQLGVVLPRERKKHEYLEAVKNRYKHLPEVKRIVRHRHLPRPVYKAANLRRTMIEA
ERRKEQRRKAHSAPGSIVTEPVRKRRIIKEVE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgaaagtaatatcacgttctacagatgagttcactcgagaacgaagccaagat
ctgcagagggtgtttcgtaatttcgaccccagcttacgatcccaagagaaagccgtcgag
tacgtccgagctcttaatgctgccaaattggacaagatatttgcaaggccctttattgga
gctatggatgggcatagagattccattaagtgtatggcaaagaacccaaattacttgaaa
gcaattttttctggttctgacgacggagatatccgactttgggatttagcttccaggcga
acagtttgtcaatttcctggccaccaaggtgctgtacaaggtttgacagtatcaacagat
ggaagcattcttgtatcatgtggcagtgattgcactgttaggctctggaatgttcctgat
gctaatcttgcagattcagatattctttccgataattcagctaagccagtagcagtttat
gtttggaagaatgcattccgggctgttgatcaccaatgggatggtgatctctttgccaca
gctggtgctcaagtagatatatggaatcacaataggtctcagccagtgaacacttttgat
tggggagcagacacaactatatctgttcgatttaatccaggagagccaaatatcttggca
acatcagctaatgatcggagcataacattgtatgatctgcggatgtcatccccggcaagg
aaagttattatgaggacgaaaaccaattctattgcttggaacccaatggagcctatgaac
ttcaccgcggcaaatgaggattgcaattgctacagctatgatgccagaaagctggaggag
gccaagtgtgtgcacaaagatcatgtttctgcagtaatggatattgatttctcaccaact
ggtcgggaatttgtaactggatcttatgatagaacagtcagaattttccagtataatggt
ggtcacagtcgagaaatctaccatacgaagagaatgcaaagggtattctgtgtgaagtat
agctgtgatgccagttatgtcatttcgggaagtgatgatactaaccttaggctctggaaa
gctaaagcatcagaacaattgggagtggtacttccaagggaaagaaagaaacatgagtat
cttgaagctgttaagaatcgttacaagcatctgcctgaagttaagcgtattgtgaggcac
aggcacttgccaagaccagtttacaaggcagccaacctcagacgcactatgattgaagca
gaaagaaggaaagaacaaagaaggaaagctcacagtgcccctggaagcattgtgactgaa
ccagttcgtaaaagaagaataatcaaagaggttgagtga
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