Gossypium raimondii: 105794851
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Entry
105794851 CDS
T04129
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
gra
Gossypium raimondii
Pathway
gra03013
Nucleocytoplasmic transport
gra03015
mRNA surveillance pathway
gra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105794851
09122 Translation
03013 Nucleocytoplasmic transport
105794851
03015 mRNA surveillance pathway
105794851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105794851
03041 Spliceosome [BR:
gra03041
]
105794851
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
105794851
Spliceosome [BR:
gra03041
]
Common components
Common spliceosomal components
Cap binding complex
105794851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
105794851
NCBI-ProteinID:
XP_012479668
UniProt:
A0A0D2RII7
LinkDB
All DBs
Position
3:complement(56306950..56309516)
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AA seq
253 aa
AA seq
DB search
MASLFKDPAKLSAYRDRRFNGSQEEFEQALLTSTTVYIGNMSFYTTEEQVYELFSRAGEI
KKIIMGLDKNSKTPCGFCFVLYYSREDAEDAVKYISGTILDDRPIRVDFDWGFVEGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGAGSLGSFPPVMAPHYGRHG
GGHGHGGSYRHGRDYHRKRHRDDDHYARESSKRNSDHESRRASDHDARPEKNPRFRESGD
SDEEEEDDRKRRS
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggcttctctattcaaggacccagctaagctttcagcgtaccgagacagaagattcaat
ggttcgcaagaggaattcgagcaagcactcctcacttcgacaaccgtctacatcggaaac
atgtctttttacactactgaagaacaagtttatgagcttttctctagagccggtgaaatc
aagaaaattattatgggccttgacaagaactctaaaacgccttgcggcttttgctttgtc
ttgtattattctagggaagatgctgaggatgctgttaaatacattagtgggacaatcctt
gatgaccgcccgattcgtgtagattttgactggggatttgttgaaggaaggcaatggggc
cgtggtcgaagcggtggccaagtgcgagatgaatatcgaactgattacgatcctggcaga
ggtggttatggaaaattagttcaaaaagaattggaagcacaaagacagcttgtagattat
ggtgctgggtcactgggctcattcccaccggttatggcccctcattatggtaggcatggt
gggggccatggtcatggtggttcttatcgtcatgggagagattaccatcggaagcgacac
cgagatgatgaccactatgcacgtgagtcctcaaagagaaactcggatcatgaatccagg
agagcctctgaccatgatgctagaccggagaagaatccacgtttccgagagagcggtgat
tctgatgaagaagaagaagatgatcgtaaacggcgatcttaa
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integrated database retrieval system
