Gossypium raimondii: 105794863
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Entry
105794863 CDS
T04129
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gra01009
]
105794863
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gra03021
]
105794863
Enzymes [BR:
gra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
105794863
Protein phosphatases and associated proteins [BR:
gra01009
]
HAD phosphatases
Fcp/Scp phosphatases
105794863
Transcription machinery [BR:
gra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
105794863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
105794863
NCBI-ProteinID:
XP_012479686
UniProt:
A0A0D2PWB3
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Position
3:complement(56502916..56507069)
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AA seq
708 aa
AA seq
DB search
MNKGSSSMAKDQSISVSEAVHKIQLHLLDGIRDEKQLISSGSLISRSDYEDVVTERSISN
TCGYPLCQNPLPSEPRRRGRYRISLKEHRVYDLQETSRFCSADCLINSRAFAGSLQEERC
SVLNHAKLNAILSLFDDVDLNDEDLGKNGDLGFSNLKIKENEEIKAGEVSSVGPSNAIEG
YVPQRELVSKPSSSKNSKNGVFDSSSSKLGDIKGDYFVNNEIDFTSAVIMNNEYLDFTSA
VIMNNEYTTSKNPGSLRQSQRTKPSSMKDVINEMDFTSEIIMNDEYTVSKTPPGSRQGSS
GSKLKKTEGQGVCKDFEEKCMRSESSSALTKEDSGIVEMPSTKCVDQSGLDTINAEAEKE
THSDKAVASSGVVLKSSLKSAGAKKLNRSVTWADKKNVDGARKGSLCEVKEMDAQKGDSE
NLGRAEDGDDDDNMLRFASAEACAMALSEAAAAVASGDSDVNDAVSEAGLIILAHPLEAD
KEEKVENIDTLEAEPEPEEGPVKWPTKPGIPRSDFFDPEDSWFDAPPEGFSLTLSTFATM
WNALFEWITSSSLAYIYGRDETFHEEYLSVNGREYPQKIVLRDGRSSEIKETLAGCISRA
FPAIVTALRLPIPISTLEQGMGRLLDTMSFVEALPAFRMKQWQVIVLLLIDALSVCRIPA
LTPHMTNGRMLLHKVLDGAQISMEEYEVMKDLIIPLGRAPHFSAQSGA
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaggttcatcatcaatggcgaaagatcagtcaatctcagtttcagaagcagta
cacaagattcaactccatctccttgacggaatacgagacgagaaacaactaatctcctct
ggttccttaatttctcgaagcgactatgaggatgtcgtaaccgagaggtcgatttccaac
acttgcggttaccctctctgccaaaaccctttaccttccgaaccccgtcgaagaggccgt
tatcgaatctctttgaaagagcaccgagtttacgatttacaagaaaccagccgcttttgc
tccgccgattgcctgattaatagccgagctttcgctgggagtttacaagaagagaggtgt
tccgttttgaatcatgcgaaacttaatgcgattttgagtttgtttgatgacgtggatttg
aacgatgaggatttggggaagaatggggatttagggttttcgaatttgaagattaaagaa
aatgaggaaataaaagctggggaagtttcttcggtgggtccttccaatgccattgaaggc
tatgttccacaaagagaattggtttctaagccttcatcttctaagaacagcaaaaatgga
gtgtttgattctagcagttccaagctgggtgatatcaaaggagattattttgtcaataat
gagatagattttactagtgccgtaattatgaacaatgaatatttagattttactagtgcc
gtaattatgaacaatgaatataccacttctaagaatcccggtagtcttagacagagtcaa
agaacgaagccgagtagtatgaaagatgtgattaatgagatggactttactagtgaaata
atcatgaatgatgaatatactgtttccaagacacccccggggtcaagacagggttcttct
ggttcgaaattgaaaaaaacagaagggcaaggagtttgtaaagacttcgaagaaaaatgt
atgagatcagaatcctcctctgctttgacgaaagaggattctggcattgtagaaatgcct
tcaactaaatgtgtcgatcagagtggtttggatacaattaatgctgaagcagagaaggaa
acccattctgacaaggccgtggcatcaagtggggttgtgcttaaatcctctcttaagtct
gctggagcaaagaaacttaatcgctcagttacttgggctgataaaaaaaatgttgatggt
gctcggaaagggagtctttgtgaagttaaagaaatggatgcacagaaaggagattctgaa
aatcttggcagagcagaagatggtgatgatgatgataatatgttacgatttgcatccgca
gaagcttgtgctatggctttgagcgaggcagcagcagctgtggcatctggagattctgat
gtcaatgatgctgtttctgaagctgggctgatcatattggcacatccacttgaggcggac
aaggaggagaaagtggagaatattgatacacttgaagcagaacctgaaccagaagaaggc
cctgtaaagtggccaacaaaacctgggattccacgctctgatttttttgacccagaggac
tcatggtttgatgctccccctgagggtttcagtttaactctgtcaacttttgcaacaatg
tggaatgcgctttttgaatggataacatcatcttctttggcttatatatatgggagagat
gaaactttccatgaagagtacctctcagttaatgggagggagtatccgcagaagattgtc
ttacgagatggtcgttcttctgaaattaaagaaactcttgctggttgtatttctcgtgct
tttcctgctattgttactgctctcagactgcctataccgatatctactttggagcaggga
atgggccgcctgctagatacaatgtcttttgtggaagcacttccagcattcagaatgaaa
cagtggcaagtaattgttcttctattaattgacgccctttcagtttgtagaataccagcc
ctcactccacacatgactaatgggaggatgcttcttcacaaggtgctggatggtgcccag
ataagtatggaagaatatgaggttatgaaggatctaataataccacttggccgagcacct
cacttctctgcacagagtggagcttga
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