Gossypium raimondii: 105795024
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Entry
105795024 CDS
T04129
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
gra
Gossypium raimondii
Pathway
gra04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105795024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105795024
Membrane trafficking [BR:
gra04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
105795024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
Sec7-like_HDS
BIG2_C
DCB
Mon2_C
Motif
Other DBs
NCBI-GeneID:
105795024
NCBI-ProteinID:
XP_012479908
LinkDB
All DBs
Position
3:complement(58763798..58772504)
Genome browser
AA seq
1716 aa
AA seq
DB search
MLASQTLGGPSRCGRVLGPPLDKIIKNAAWRKHTHLVSSCKSALDKLETLSDTGLSDPTS
PLLGISSSDANFVLNPILLALETNYVKVAEPALECTFKLFSLGVARGEIHGNVSNPILYK
IVEAVCKVGGIGEESLELAVLRVLLSAIRCPCVLIRGDCLLNVVRTCYNVYLRGLSGTNQ
ICAKSVLAQIMLIVFTRAEEDSIDVSIKTVSVSELLEFSDKNLNEGSSIYHCQNFVSEVM
SASEGVPDLKLSQPSKDQELQNVELKTSKWEEEEIGELEAKEGGVESGSGGVSKIREDGF
LVFKNLCKLSMKFSSQENDDQILLRGKTLSLELLKAVMDNGGSIWRSNVRFLNVIKQYLC
LSLLKNSALSVMSIFQLQSCIFMSLLTKYRTGLKDEIGIFFPMLILRVLENVLQPSFVQK
MTVLNLLEKIAADSQIIIDIFVNYDCDVDSPNIFERIVNGLLKTALGPPPASTTTLSAVQ
DITFRHESVNCLVSIIKSMGAWMDQKLTIGDSDLRKSFKSDTAAEGHSTLTAEDGTVSDC
ELQPEMNSELSNAATLEQRRAYKIELQKGVSLFNRKPSKGIEFLINTKKVGNSPEEVAAF
LKSNTTGLNEAMIGDYLGEREDFALKVMHAYVDSFDFKSMDFGEAIRFFLQGFRLPGEAQ
KIDRIMEKFAERYCKCNPSSFTSADTAYVLAYSVIMLNTDAHNSMVKDKMNKSDFIRNNR
GIDDGKDLPEEYLGALYDQIVNNEIKMNADSSVPQSMQANSLNKLLGLDGILNLVTWKQT
EEKALGANGLLIRQIQEQFKAKSGKSESVYHSVSDVAILRFMVEVCWGPMLAAYSVTLDQ
SDDRIATTQCLQGFRHAVHVTAVMGMQTQRDAFVTSTAKFTFLHCAADMKQKNVDAVKAI
ISIAIEDGNHLQESWEHILTCLSRVEHLQLLGEGSSTETSILSVPNTEIDEKVPKPSGIQ
SLKKKGSLQNPAVMAIVRGGSYDSAAVGANSSGLVTPEQINQFIANLNLLEQIGSSELNH
VFVHSQRLNSEAIVAFVKALCKVSIAELQSPTDPRVFSLTKLVEIAHYNMNRIRLVWFRI
WNVLSDFFVSVGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIVMQKS
NSIEIRELIVRYVSQMVLSRVSNVKSGWKSVFMVFTAAAVDERKNIVLLAFGTMEKIVRE
YFPHISETDASTFSDCVRCLIKFTNSKFDSDISLNAIGFLRFCAIKLAEGGLVCADKSPD
DGSSVSAVTKNDRDLQSFADSDDHASYWVPLLAGLSELTSDSKLAIRKSSTEVLFNVLKG
HGHLFSRAFWIGVFSSVVLPLFNGASPVKQDSPTAKSPRPDGSTWDPEISAAAAQSLVDL
VIRFFNVLRPQLPNVVSILAGYLKSTKQGPASTGVSATYRLTGELGSRFSKDEWQEILLA
IKEAATSTLPGFMKILRSMDDIKVPENSRSSTNTETSSDHGLTKDDLEEDNLQTSAYVVS
KMKSFIAVQLLIMQVITDIYKANLQFLVASNINIIVEIFSSITSHAQQLNSETVLQKKIK
KVCSILETSEPPMVHFENEAYQNYLNFLQDLIKNNSSAPKEMNLRSLVAVCEKILLIYLS
CTDYNYARRQKPVEIPVTHWILPLGVAKKEKMAARTPLLVSALKALNCLEKDSCRKYIAD
IFHLLVDLVRSDHSSNEVQHALSNIFQACIGPIIMP
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atgttagcttcccagacgctcggaggaccgtcgaggtgcggccgtgtgctaggcccaccg
ctcgacaagatcataaaaaatgccgcatggcgaaaacacacgcacctcgtttcctcatgc
aaatccgctctcgacaagctcgagaccctctccgacaccggcttgtccgatccgacttca
ccgctgctcggcatttcatcttccgatgccaacttcgtccttaacccgatccttctcgcc
ttggaaaccaactacgtcaaagttgccgagcccgccctcgaatgcaccttcaaattattc
tccctcggcgtcgctcgtggcgagatccatggcaacgtttccaatccgatcctctacaaa
atcgtcgaagccgtttgcaaagtcggcggcatcggggaggaatcgctcgagctcgccgtg
ctgcgagttttgctctccgccatccgatgtccttgcgttttgatccgtggtgattgcttg
ctcaacgtcgttagaacttgttataacgtatatttacgcggtttgagtggaaccaatcaa
atctgtgctaagtccgttttggctcagattatgctaattgtattcacccgagcggaagaa
gattccattgatgtttctatcaaaacagtgtcggttagtgagcttttagagtttagtgat
aagaatttaaatgaaggaagttcaatttatcattgtcagaattttgttagcgaggttatg
agtgccagtgaaggggttccagatttgaagctatcgcagccgagtaaggatcaggagctg
caaaatgttgagttgaagacgtcgaaatgggaagaggaggaaattggggagttagaggcg
aaggaagggggggtggaatcgggttccggtggggttagtaaaattagggaggacggcttt
cttgtttttaagaatttgtgtaagttgtcaatgaagttttcatcacaggagaatgatgat
cagatccttttaagagggaaaacgctgtctttggagctcctcaaggctgttatggataat
gggggttccatttggcgctcgaatgttaggtttcttaacgtaattaagcagtatctctgc
ttatcattgttaaaaaacagtgccttgtcagtgatgtcaattttccagctccaaagttgt
atttttatgagcctgctaacgaaatatagaacagggttgaaagatgaaattggaatattc
tttcccatgcttatcctccgagttctagagaatgttttacagccaagttttgtacagaaa
atgacagtccttaatctgttggaaaagattgctgcggattcacagattatcattgatata
ttcgtgaattatgactgcgatgtggattcaccaaacatatttgaaaggattgtcaacggc
cttctcaaaacagctctaggaccgccacctgcttcaacaactactttgtctgcagtccag
gatataactttccggcatgaatcagtaaattgcttggttagcattattaagtcaatggga
gcttggatggaccaaaagctgacaataggtgattctgacttgcgtaagagcttcaagagt
gacactgcagcagagggccattcaactttgactgcagaagatggaacagtctctgattgc
gagttgcaaccagaaatgaattctgaattgtcaaatgctgctacacttgagcaacggcgg
gcttacaagattgaacttcagaaaggtgtttcgttgtttaacaggaagccatccaaaggc
attgagtttcttataaataccaaaaaggttggcaactctccagaggaagtggccgctttt
ctgaagagtaacactactgggttgaatgaagccatgattggtgattatttgggtgaaagg
gaggattttgctttgaaagttatgcatgcttatgtggattcctttgatttcaaatctatg
gattttggtgaagcgataaggttcttcctacaaggcttcaggttaccaggagaagcacag
aaaattgaccgcatcatggaaaagtttgctgagcgctattgtaaatgtaatcctagctca
tttaccagtgcagatactgcctatgtactggcatactctgtcataatgctcaacactgat
gcccataatagcatggtcaaagacaagatgaacaagtctgatttcattcgaaacaatcga
ggaatagatgatggcaaagatttacctgaggagtatcttggtgctctttatgatcaaatt
gtgaataatgaaatcaagatgaatgcagattcttctgttcctcaaagcatgcaggcgaac
agcttaaataagttattgggtttggatggtatactcaatttggtgacttggaagcaaaca
gaagaaaaggcattgggtgcaaatgggcttcttataagacaaatccaagagcagtttaag
gcaaagtcgggaaaatcagagtctgtttatcattctgtttcagatgtagcaatcttgagg
tttatggtggaggtctgctggggacctatgctggctgcatacagtgtcactcttgaccag
agtgatgatagaattgctaccactcaatgcttacagggctttcgacatgctgtgcatgta
actgccgtaatgggaatgcagacgcagagagatgcttttgtcacatcaacggcaaagttc
acttttctccattgtgctgcagacatgaaacaaaagaatgttgatgccgtaaaagcaata
atatctattgccattgaagatggtaaccatcttcaggaatcctgggagcatatattgaca
tgcctgtccagagttgagcatttgcaactgttgggagaaggttcatcaaccgaaacatcc
attttatccgtgcctaacactgaaatagatgaaaaggttccaaaaccttctggtattcaa
tccctgaagaaaaaaggatcactccagaatccagctgtaatggcaattgtgcgaggaggg
tcatatgacagtgccgctgttggagccaatagttcaggactggtaaccccagagcagatt
aatcaattcattgcaaacttgaatttattggaacagataggaagttccgagttgaaccat
gtttttgtacatagccaaagattaaacagtgaagcaatagtggcttttgtgaaggccctt
tgcaaggtttctatagcagagttgcagtctccaacagaccctcgagtttttagcctcaca
aaactagttgaaattgcgcactacaatatgaaccgcatcagattagtttggtttcgcata
tggaatgttctctctgatttctttgtttctgttggactgtccgagaatttatccgtggca
atctttgtgatggattccttgcggcagcttgctatgaaattcttagaacgtgaggagctg
gcaaactacaatttccagaatgaatttttgagaccatttgtgattgttatgcaaaaaagc
aactccatagaaataagggaattaatagttcgatacgtttctcagatggtactcagccgc
gtcagtaatgtgaaatctggatggaaaagtgtctttatggtgtttacagctgctgctgtg
gatgagcggaagaatattgtcctgctagcttttgggaccatggaaaaaatagttagagag
tactttcctcatatcagtgagacagacgcttctacttttagtgattgtgtgcgatgcctc
atcaagttcacaaatagcaagtttgacagtgatattagccttaatgctattggatttctc
cggttttgtgctatcaaacttgctgagggaggccttgtttgcgctgataagagcccagac
gatggttcatctgtttcagctgtaactaagaatgatagagatctacaaagtttcgctgat
agtgatgatcatgcatcctattgggttcccttgctagcaggtttatcagaactaacatcc
gactcgaagttagccatccgaaagagttcgacggaagtgcttttcaacgtcctgaagggt
catggtcatcttttctcacgagcattctggattggtgtttttagctctgttgttctcccc
ttatttaatggtgcatctcctgtaaaacaggattcaccaacagcgaaatctcctcgtcct
gatggaagtacatgggatcctgaaatttctgctgccgcagcgcagtctcttgtagatctt
gttataaggtttttcaatgtattgagacctcaactaccaaatgtagtatctatactggca
ggatacttaaaaagtacaaaacagggtcctgcaagcactggagtttcggcaacatatcgt
ttgacaggagagttaggaagcagattttcaaaagacgaatggcaagaaatccttctagct
ataaaagaagctgccacttcaacattgcctgggtttatgaagattttgagaagcatggat
gacatcaaggtgcctgagaattctcgatcctctactaatactgaaacaagctctgatcat
ggactgaccaaggatgaccttgaggaagataatctgcaaacttcagcttatgtggtttcg
aaaatgaagagttttatcgcggtccagctactgattatgcaggttataactgatatatac
aaagcgaacctacaattcttggtagcttccaacataaatatcattgtcgagatattttct
tccattacatcacatgctcagcaactgaactccgagactgtcctgcaaaagaaaataaag
aaagtatgctcgatcttggagacctccgaaccgcccatggttcacttcgagaacgaggct
tatcaaaattacctcaacttcctccaagatttaatcaaaaacaattcatccgccccaaag
gagatgaacctaagatcactagtggcagtgtgtgaaaaaatattgctgatataccttagc
tgcaccgattacaactacgcacggcggcagaaaccggttgagataccggtgactcattgg
attctccccttgggagtagccaaaaaggaaaaaatggcagctaggacacctctacttgtg
tctgcattgaaggcattgaattgcttggagaaggattcctgcagaaagtacattgcagat
atctttcatctgttggtcgatctggttcgaagcgatcatagctcgaatgaagttcaacat
gctctaagcaacatattccaggcatgtataggtccgataataatgccataa
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integrated database retrieval system
