Gossypium raimondii: 105795295
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Entry
105795295 CDS
T04129
Name
(RefSeq) SWI/SNF complex subunit SWI3D
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
gra
Gossypium raimondii
Pathway
gra03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105795295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gra03021
]
105795295
03036 Chromosome and associated proteins [BR:
gra03036
]
105795295
Transcription machinery [BR:
gra03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105795295
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105795295
PBAF complex
105795295
GBAF(ncBAF) complex
105795295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
105795295
NCBI-ProteinID:
XP_052484671
LinkDB
All DBs
Position
3:61265528..61271468
Genome browser
AA seq
1027 aa
AA seq
DB search
MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANSLSGSSSSSTPSKRATREKSSNL
ISHSSINHNGPLTRARQGAPSGNLALGLGSGFGGAKLEERILVKESVKAEDLEELNKASE
ELEALEAKIEAEFEAVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPD
VYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDS
AVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLL
RLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEA
SGLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNSDD
NIDTNSKETSAPAVVTDETSVPKDVSEATETKTTSQEDQVPQEDQTQTTPVDASKPEDEK
EKRESEEMSKPETGTDIKCAPETSKPEEMDEAKDGQDTKENCAIMALREAFEAVGYNLTS
ESTLSFADVGNPIMALAGFFARLAGPKIGAASAQASLKALSGSSPNIQLAARNCFLLEDP
PDDKKEQTGSESVVNDVGNQDAQNVENSENKSLKEDKSTPVLDQKSSSSNHADQNAETSL
PEEKVTSASPNCLSTDKKEPGTSATSKEAKKANQSKDHEPGVMRGSDNLASQVPPSSAEE
TGGKETSAQESSQRTEVVKEVEMSESVPLEKNEPSDAAASEPVAELSEPTEALKNVETVS
GSPSGAKNEQQPVKSSSGGEISQPTKASNDIEMVSDSQPSERSEPQQPVTSNSVNENGTI
TDVIKEGKSESHTSTETKDDSSIDKVKRAAVTALSAAAVKAKLLADQEEDQIRKLTTSLI
EKQFSKMEAKLGFFNEMEGLMMRVKEQLDRSRQKLYHERTQIIAARLGLPASSSRAMPPA
NTANRIATNYANSVARPPMRTTAARPPMSRPMGPMAPTSSNPFVSTTVAGSSIRRASQDN
LSSVRTK
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaacgccgggacgcggggaactcaccggctggaccgagctcagccgagctg
gagccggcaacaactcgccgtcgagctggagcacaaaagaggaaagctaattctctttcc
gggtccagctcatcatcgacgccgtcgaaacgggctacacgggagaagtcatctaacttg
atctcccactcttcgatcaaccataacggtcctttaactagggctcgccaaggagcgcct
agtggaaacctagccttgggtttgggctccggattcggtggcgcgaagcttgaggagagg
attttggttaaagagagtgtgaaggctgaagatttggaggaattgaataaggcaagtgaa
gagttggaggctttggaagctaagattgaagctgagtttgaagctgttaggtctcgtgac
agtaatgcgcacgtggttcctaatcattgcggatggttttcatggaaaaaagctcaccat
gtggaggaatgtatattaccttcattctttaatgggaaatccccagtgcgtacccctgat
gtgtacttggagatacgtaatagcattatgaagaaatttcatgcaaatccgagtgtacaa
attgagtctaaagatctgccagatattgaagttggcgacttggatgcaaggcaggaagta
ctggagttcttggactactggggtttgattaactttcatccattccctccaggtgattct
gccgtggtcagtgctgatggtgattgtgacgggatagcgaaaaaggattctttgcttgaa
aatttgtttcattttgaggtgattgaatcgcgcccatcagttgttcccaaagctaacctt
tcaactccatctatgccatctgggtttcttccagagtctgcagttcttgatgatttgttg
agacttgagggaccatctgttgattaccattgcaactcttgttcagctgattgctctcgg
aagcgctaccattgccagaagcaggcagattttgacttatgtactgattgctttaacaac
cggaagtttggctctggcatgtcttcttctgattttattctcatggagcctggtgaggcc
tctggccttagcggcgggaagtggacagatcaggaaactctccttcttctcgaggcacta
gaactttataaagaaaactggaatgagattgcagagcatgttgcgacaaaaaccaaagct
caatgcatactgcactttcttcaaatgccaattgaggatgtattctttaattctgatgat
aatatagacactaattccaaagaaacatctgcacctgctgtagtgactgatgaaacatct
gtccctaaagatgtctctgaagcaacagagactaagactacttctcaggaagatcaggtt
cctcaagaggaccagacccagactacacccgtggatgcttcaaaacctgaagatgagaaa
gaaaagagagagagtgaggaaatgtcaaaacctgaaacaggaaccgacataaaatgtgct
ccagaaacatcaaagccagaagaaatggatgaagcaaaagatggacaagacaccaaagaa
aattgtgcaattatggctctaagggaggcattcgaagctgttggttataatttaacatct
gagagtacactctcatttgctgatgtgggaaaccccatcatggcattggcaggattcttt
gcacgccttgctgggcccaaaattggtgctgcttcagcacaggcttcactgaaagcatta
tctggtagttctcccaacattcaactggctgcaaggaactgctttcttttggaagatcca
ccagatgacaagaaggaacaaactggttctgagagtgttgtcaatgatgtcggtaatcag
gatgctcagaatgtcgaaaattcagaaaacaaaagcctcaaggaggacaagtccacccca
gttttggatcagaaaagttcatcgagcaaccatgcagaccaaaatgctgaaacttctctt
cctgaagaaaaggtgacatcagcttcacctaattgcctatccactgataagaaagagcca
ggtacttctgcaaccagtaaggaagctaaaaaggctaatcaatcaaaagatcatgaacca
ggtgtaatgaggggatcagataacttggcatcccaggttccaccaagttctgcggaggag
actggtgggaaggaaacctcagcacaagagtcttctcaacgaacagaggttgtgaaggaa
gtagaaatgtccgagtctgttccattagaaaagaatgagccttctgatgcagctgcatca
gagccagtggcagagctatctgaaccaacagaggcattgaaaaatgtagagacggtttct
ggctctccatctggagcaaagaatgagcaacaaccagttaaatcaagttctggtggagag
atttctcagcctacaaaggcatcaaatgatatagaaatggtgtctgattcacagccatca
gaaaggagtgaacctcagcaaccagtcacatctaattcagtaaatgaaaatggaacaatc
acagatgtgattaaagaaggtaaaagtgagagccatacctctacagaaacaaaagatgat
agtagcattgacaaagtaaagcgtgctgccgtaacagcactctcagcagctgcagtgaag
gccaaacttcttgcagaccaggaagaggatcaaatccggaaacttacgacatcattaata
gaaaagcagttttctaagatggaagccaaattaggtttcttcaatgaaatggagggtctc
atgatgagggtaaaagagcaattagacagatcaaggcaaaagctttaccatgaacgaact
caaattattgcagctcgactgggcctaccagcttcctcctctagagcaatgccaccagca
aataccgcaaatagaattgcaaccaactatgcaaattcagtcgcaaggcctccgatgaga
acaactgccgcaagaccaccaatgtcaagacctatggggcctatggctcctacctcatcc
aacccatttgtatctacaacagttgcaggaagttcaatccggcgtgctagccaagacaac
ctttcttcagtcagaacaaagtag
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integrated database retrieval system
