Gossypium raimondii: 105796159
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Entry
105796159 CDS
T04129
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
gra
Gossypium raimondii
Pathway
gra00040
Pentose and glucuronate interconversions
gra01100
Metabolic pathways
Module
gra_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105796159
Enzymes [BR:
gra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
105796159
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
105796159
NCBI-ProteinID:
XP_012481212
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Position
3:31825835..31836031
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AA seq
487 aa
AA seq
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MQLAFGFALSLWFGFAFGNGFFSEETISAFNFGLENEIFNEQVISSFSVMDYGATGNGQI
DDSQAFNKAWKDICNANAGGETVTLEIPRGKTFLLNPLVFQGPCKAKAIRIQLGGTLIAP
LSTSWANEGVDTWIQFSNVDNLYLDGDGKIDGRGSIWWQSCMKKSVYGIFFDCKRRPGAL
HFNNCNGLQLKGLTHLNSPRAHISIKNCKDVIVSDLKISAPDESPNTDGIDISDSTSVQI
LQSIIATGDDCVAINAGSSFINITGVVCGPGHGISIGSLGDGGAYDTVEQVHVKNCTLRD
TQNGVRIKTFQGCSGYARKISFEKIVLSNARNPIIINQFYQDKGKFSKGIMKAGAIEISD
VTYSDIRGTSANDQAIDLRCDNVVGCRNIVMRNIDITPGVDCPKTYTVCNNAHGTATETQ
PRVPCLYRYGDRTVTWRGATREGVVPGGGVARLGGVALARRRYIHAGVTRARGKAGSVVA
LEADPSC
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttgcttttggttttgcactgtctctttggtttggttttgctttcggaaatgga
ttcttcagtgaagaaactatttctgcttttaattttggtctcgaaaatgaaattttcaat
gagcaagtaatttcttcctttagtgttatggattatggagctactggaaatggccagata
gatgactctcaagcattcaataaagcttggaaggatatttgtaatgcaaatgcgggcgga
gaaactgtaacacttgaaatcccgcgagggaaaacattccttctaaacccacttgttttt
cagggtccatgcaaggccaaagccattcgtattcagcttggtggaaccctaattgcaccc
ctaagcacatcatgggcaaatgaaggagtggatacttggattcaattttcaaatgttgac
aacctttatcttgatggagatggcaaaattgatggcaggggttctatttggtggcaatct
tgcatgaaaaaatcagtttatggtattttttttgattgcaagcgtcgacctggtgcttta
cattttaacaattgcaatgggcttcaattaaagggactcactcatttgaacagtccaagg
gctcatatatcaataaaaaactgcaaagatgttattgtctctgatcttaagattagtgca
ccagatgaaagcccaaacacagatggaattgatatttccgattctaccagcgttcaaatt
ctacaatccatcattgcaactggtgatgattgtgttgctatcaacgctggttcatctttt
atcaatatcactggtgttgtttgtggtccaggccatggtatcagtattgggagccttgga
gatggtggagcttatgacactgttgagcaagtacacgtgaaaaattgtactttaagggac
actcaaaatggtgtgaggatcaaaacatttcagggttgctctggttatgccagaaagatc
tcgtttgagaaaattgtacttagcaatgctagaaacccaattatcataaaccaattctat
caggataagggcaaattttcgaaaggaataatgaaagcaggggccattgaaattagtgat
gttacatactctgatattcgaggaacatcggccaacgaccaagcaatcgatctgagatgc
gacaatgtggtaggttgcaggaacatagtaatgcgtaatatcgacataacaccaggcgtt
gattgtcctaaaacctataccgtgtgcaataatgctcatggaactgccactgaaacacag
cctagagttccttgcttgtataggtacggagaccgtacggtgacgtggcgcggtgcaaca
cgtgaaggcgtggtccctggtggtggcgtggctcggctcggaggcgtggctttggcgcgg
aggcgctacatacacgcaggcgtaacacgcgcgagggggaaggctggctctgttgtggcg
ctggaggctgaccctagctgctag
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