Gossypium raimondii: 105796482
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Entry
105796482 CDS
T04129
Name
(RefSeq) heat stress transcription factor A-5
KO
K09419
heat shock transcription factor, other eukaryote
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gra03000
]
105796482
Transcription factors [BR:
gra03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
105796482
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Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
DUF7491
APG6_N
DUF3450
TMF_TATA_bd
EzrA
TolA_bind_tri
MSP7_C
PEP-utilisers_N
DUF4337
Csm1_N
Motif
Other DBs
NCBI-GeneID:
105796482
NCBI-ProteinID:
XP_012481655
UniProt:
A0A0D2REN8
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All DBs
Position
3:2375678..2377998
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AA seq
494 aa
AA seq
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MDPTAPSASVVGGGGGGGGGPAPFLMKTFDMVDDSSTDDIVSWSSNKKSFVVWNPPDFAR
LLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFANEDFVKDQRHLLKNIHRRKPIHSHS
NPQGSLIDHERAGYEEEIEKLSREKAALEADVLRSEQERSALKHQVEELTQQADQMERRQ
DTLFNFLEKALQDPAFAEHLFRRIESMDDVVAYNKKRRLPQIDQTKPVGDHSLLDNKSSS
TPEFGNVVHLDFSNKLRLELSSAVSEINLVSQSTQSSNEDGESPQRRVSQGEPKDDNIRP
QGLLFTPETLDISDTGTSFTFNMDSSFSQRVSMNESPAVHSLQQRLSSNEEPDSHISCQL
NLTLASSSLQVNKSPSLTRMSQPSWEIGKVSESRSNANSKDSDSGPFHNSRNMIDGETTL
SSSKEGPNTNQEPAAAPVRVNDVFWEQFLTERPGSSDNEEASSNYRANPYEEQDDKRSGH
GLARNTKNIEQLSL
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggacccaactgcaccctccgcgtcggtcgtcggcggcggtggcggcggcggaggaggg
ccggcacctttccttatgaaaacattcgacatggtggacgactcatcgaccgacgacatc
gtttcatggagctctaacaaaaagagctttgtggtttggaaccctcctgattttgctcgc
cttttgcttcccacttatttcaagcacaataatttctccagcttcatcaggcagcttaat
acctatgggttccggaagattgatcccgaacgatgggaatttgccaatgaagatttcgtg
aaagatcaaaggcatcttcttaagaatattcatcgaagaaaacctattcacagccatagt
aatccacagggttctttgatagatcatgaaagagctggatacgaagaagaaatcgaaaag
ctttcacgtgagaaagctgcacttgaggctgatgttttgaggtctgaacaagagcggtca
gctttgaagcatcaggtggaagagctgacacaacaagctgatcaaatggagcgtaggcaa
gacactttgtttaacttcttagaaaaggctttacaagaccctgctttcgccgaacatctt
tttcgtagaattgaatctatggatgatgttgtggcatataataagaaaaggagactgcct
caaattgatcaaaccaagccagttggtgaccatagtcttttggacaacaaaagtagttct
acacccgagtttggaaatgttgtccacctcgatttctcgaacaagcttagactagaattg
tcatcagctgtttcggagattaacttggtttctcaaagcacgcaaagttctaatgaagat
ggagaaagtccacagagaagggtttctcaaggagaaccaaaagatgataatatcagacct
caggggcttttattcacacccgaaacattagacatttcagatacaggcacatcttttaca
ttcaacatggattcatctttctctcaaagagtatcaatgaatgaaagcccggcagtgcat
tcactgcaacagagattaagttccaatgaagaacctgatagtcatatttcctgtcagtta
aatctaactctggcatcttcttcattgcaagtcaataaaagtcccagcttaactaggatg
tcccaaccaagttgggaaatcggaaaagtctccgagtcaaggtctaatgccaacagtaaa
gactctgattctggacctttccataatagcagaaacatgattgatggggaaacaacatta
tcgtcatcgaaagaaggccctaacacaaatcaagagcctgccgctgctccggttagagta
aatgatgtattctgggaacagttcctcaccgagagaccaggttcctctgacaatgaagag
gccagttccaattatcgagcaaatccatacgaagagcaagacgacaaaaggtcaggccat
ggactagcaaggaataccaagaacatcgagcagcttagtctttag
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