KEGG   Gossypium raimondii: 105796685
Entry
105796685         CDS       T04129                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
gra  Gossypium raimondii
Pathway
gra03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105796685
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gra03019]
    105796685
Messenger RNA biogenesis [BR:gra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105796685
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     105796685
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 105796685
NCBI-ProteinID: XP_012481954
UniProt: A0A0D2PTD9
LinkDB
Position
7:complement(52006054..52008929)
AA seq 128 aa
MSWAGPDDIFLSTSLATYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGNL
YCDIPLGLYVIRGENVVLIGELDLEKEELPSHMTAVSAAEIKRAQKAEREATDLKGSMRK
RMEFLDFD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggctggccctgatgatatctttctctccacttctcttgctacttatctagac
aagaaactccttgtcttgcttagagatggccggaagcttttgggattactacgttcattt
gatcaatttgctaatgttgttctagaaggagcttgtgagcgagttattgttggcaatttg
tactgtgatatccccttgggtctatatgtaatccgtggggagaatgttgtcttaatagga
gagctggacttggaaaaggaagagcttccatctcatatgactgctgtgtcggctgctgag
attaaaagggcacagaaagccgaaagggaagcaacagatctgaagggctccatgagaaaa
cgaatggagtttctcgatttcgactaa

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