Gossypium raimondii: 105796685
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Entry
105796685 CDS
T04129
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
gra
Gossypium raimondii
Pathway
gra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105796685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105796685
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105796685
mRNA degradation factors
5'-3' decay
Lsm complex
105796685
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
105796685
NCBI-ProteinID:
XP_012481954
UniProt:
A0A0D2PTD9
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Position
7:complement(52006054..52008929)
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AA seq
128 aa
AA seq
DB search
MSWAGPDDIFLSTSLATYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGNL
YCDIPLGLYVIRGENVVLIGELDLEKEELPSHMTAVSAAEIKRAQKAEREATDLKGSMRK
RMEFLDFD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggctggccctgatgatatctttctctccacttctcttgctacttatctagac
aagaaactccttgtcttgcttagagatggccggaagcttttgggattactacgttcattt
gatcaatttgctaatgttgttctagaaggagcttgtgagcgagttattgttggcaatttg
tactgtgatatccccttgggtctatatgtaatccgtggggagaatgttgtcttaatagga
gagctggacttggaaaaggaagagcttccatctcatatgactgctgtgtcggctgctgag
attaaaagggcacagaaagccgaaagggaagcaacagatctgaagggctccatgagaaaa
cgaatggagtttctcgatttcgactaa
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