Gossypium raimondii: 105796771 Help Entry 105796771         CDS       T04129                                  Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism gra  Gossypium raimondii Pathway gra03040   Spliceosome gra04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:gra00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     105796771   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     105796771  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:gra03041]     105796771    04121 Ubiquitin system [BR:gra04121]     105796771    03400 DNA repair and recombination proteins [BR:gra03400]     105796771 Enzymes [BR:gra01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      105796771 Spliceosome [BR:gra03041]  Complex B   Other components    Prp19 complex     105796771  Complex C    Prp19-CDC5 complex     105796771 Ubiquitin system [BR:gra04121]  Ubiquitin ligases (E3)   U-box type E3    105796771 DNA repair and recombination proteins [BR:gra03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     105796771 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40_Prp19 Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd EIF3I WD40_Gbeta WD40_MABP1-WDR62_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_DCAF12 Beta-prop_IFT122_1st Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_HPS5 U-box Beta-prop_Vps41 Beta-prop_SCAP NBCH_WD40 Beta-prop_DCAF4 Beta-prop_Aladin zf-Nse Beta-prop_WDR41 PEP5_VPS11_N Beta-prop_RIG_2nd WD40_like Beta-prop_ACSF4 V_ATPase_I_N PAS_11 WDR54 PUMA_CC Motif Other DBs NCBI-GeneID:  105796771 NCBI-ProteinID:  XP_012482027 UniProt:  A0A0D2SBD7 LinkDB All DBs Position 3:5310662..5316381 Genome browser AA seq 519 aa AA seqDB search MNCPISGELPEDPVVSKKSGLLYEKRLIERHIADYGKCPVTGEALTMEDIVPIKTGKNVK PRSLTAASIPGMLGMFQNEWDALMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK ERDEARSLLAQAERQAPLPASAITAVSNGKRASEEEDMGPGAKRMRHGVSDSIIAELTEC NAALSQQRKKRQIPPTLAPIDALERYTQLSSHPLHKTNKPGITSIDINPSKDIVATGGID SNAVLFGRTSGEILSTLSGHSKKVTSVKFVAHNDVFLSGSADKTVRIWQGSEDGNYNCRH ILKDHTAEVQAVTVHATNNYFVTASLDATWCFYDLSSGLCLTQVEDPTNSMGYTSAAFHP DGLILGTGTIGSTVRIWDVKSRGNVANFDGHTGAVTAISFSENGYFLATAAHDGVKLWDL RKLKNFRSFELYDQDTPTNSVDFDHSGSYLAMAGSDIRVYQVGSVKAEWNCIKTLPDLSG TGRATCVKFGPDARYLAVGSMDRNLRVFGLPEEDASTES NT seq 1560 nt NT seq  +upstreamnt  +downstreamnt atgaactgtccaatctccggcgagcttccggaagatcccgtcgtctccaagaaatccggc ttgctttatgagaaacgcttaatcgagcggcacattgcggactatgggaagtgtccggtt acaggggaagcgcttaccatggaggacattgtcccaatcaaaaccggcaagaatgtgaag cccagatctttaacagcagctagcatcccagggatgcttggaatgtttcagaatgaatgg gatgctttgatgctatccaatttcgcattggagcagcagctgcatacagctaggcaagag ctaagtcatgcactctaccagcatgatgctgcctgccgtgttattgcaagacttaaaaag gaaagggatgaagccaggtcattacttgcacaggctgagaggcaggcacctttgcctgca tccgcaattactgctgtgagcaatggaaagagagcttccgaggaagaagatatgggccct ggtgcaaagagaatgcgtcacggggtttctgatagtattattgctgagttaacagaatgt aatgctgctttgtctcaacaacgtaaaaagcgccagatacctccaacactagctcccatt gatgctttggagaggtatactcaactttctagtcatccccttcacaagacaaacaaacca gggatcacttcaattgacatcaatccttcaaaggacattgttgccacaggtgggattgat tcaaatgctgttttatttggtcgaacatctggagagatcttatcaacactcagtggtcac tctaagaaggttacaagtgtaaaattcgtggctcataatgatgtatttttaagtggttct gcagataagactgtacgcatttggcaaggttctgaagatggaaactacaattgtaggcat attttgaaagatcatacagctgaggtgcaagctgtcacagtccatgccacaaataactac tttgtaactgcttcgcttgatgcaacatggtgcttttatgatctttcctctggcttatgc ttgacacaggttgaagaccctacaaattccatgggttatacatctgctgcatttcatccc gatggtctcatccttggaacaggcaccataggatctaccgttagaatttgggatgtgaag agtcggggaaatgttgctaactttgatggacacactggtgcagtaacagccatatctttt tcggaaaatggttacttcctagcaactgctgcacatgatggtgttaagttgtgggatcta cgtaaattaaagaatttccgttctttcgagttatatgatcaagacacgccgactaactct gtggatttcgatcatagtgggagttaccttgcaatggcaggctcagatatacgagtttac caagttggcagcgtgaaagcagaatggaattgcatcaaaactttacctgatttgtccggc acaggtagagcaacttgtgtcaaatttggtcctgatgcaaggtacttagcagttggatca atggatcgtaaccttcgggtatttggccttccagaagaagatgcttcaacagagtcataa

DBGET integrated database retrieval system