Gossypium raimondii: 105796815
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Entry
105796815 CDS
T04129
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11 isoform X2
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
gra
Gossypium raimondii
Pathway
gra03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105796815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gra03021
]
105796815
03036 Chromosome and associated proteins [BR:
gra03036
]
105796815
Transcription machinery [BR:
gra03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
105796815
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
105796815
RSF complex
105796815
WICH complex
105796815
B-WICH complex
105796815
NORC complex
105796815
BRF complex
105796815
NuRF complex (fruit fly)
105796815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
HDA2-3
DEAD
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
105796815
NCBI-ProteinID:
XP_012482089
UniProt:
A0A0D2SBJ5
LinkDB
All DBs
Position
3:6066589..6073237
Genome browser
AA seq
1063 aa
AA seq
DB search
MAKSSKPASSDEELYNGSSSSEEERMNAQVNGEEDDEEEIEAVARSADASDEDDDAVPEE
IAGDADDDESNGADPEISKREKERLKEMQKIKKQKIQEILDTQNAAIDADMNNKGKGRLK
YLLQQTELFSHFAKGDPNSSQKKVKGRGRHASKITEEEEDEEYLKEEEDGLSGNTRLVTQ
PSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEYRGITGPH
MVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRYIREELLVAGKFDVCVTSFEMAIK
EKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLN
FLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETIL
KVGMSQMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTT
GDHLVTSAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYQYCRIDGNTG
GEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAH
RIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRF
GAEMVFSSKDSTITDEDIDRIIAKGEAATAELDAKMKKFTEDAIKFKMDDTAELYEFDDD
KDENKFDIKKIVSENWIEPPKRERKRNYSESEYFKQTLRQGGPAKPKEPRIPRMPQLLDF
QFFNTQRLSELYEKEVRYLMQTHQKNQVKDTIDVDEPEETGDPLTAEELEEKERLLEEGF
SSWSRRDFNTFIRACEKYGRNDIMSIASEMEGKTEEEVERYAKVFKERYKELNDYDRIIK
NIERGEARISRRDEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKL
GYGNWEELKAAFRASPLFRFDWFVKSRTTQELARRCDTLIRLVEKENQEYDERERQARKE
KKLAKNMTPSKRSGKQPTESPNQLKKRKQLSMDDNANSGKRRK
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatcgtcgaagccggcgtcgtccgatgaagaactgtacaatggttcgagttca
tcagaagaggagcgaatgaacgcccaggtcaacggcgaagaagacgatgaggaggagatt
gaggctgttgctcgctccgccgacgcctccgacgaagatgatgacgccgtccctgaagaa
atcgccggtgatgctgatgatgatgagtctaatggggctgatccagaaattagtaagcga
gagaaggagaggctgaaagaaatgcagaaaataaagaagcagaagattcaggaaatactg
gatactcaaaatgctgccattgacgctgatatgaataataagggaaaggggcggttgaag
tatcttttgcagcagaccgagttgttttctcattttgctaaaggtgacccaaattcatca
caaaagaaggtgaaaggaaggggtcgacatgcatcaaaaataactgaagaggaagaagat
gaagagtacctcaaggaggaagaagatggtttgtctgggaacacgcgattggtgactcag
ccttcttgtattcaggggaagatgagggactaccaacttgctggtttaaactggcttata
cgactgtatgagaatggtataaatggtattcttgcagatgaaatgggacttggaaaaact
ttgcaaactatttccttattgggctatctgcatgagtaccgtggaattactggccctcat
atggttgttgccccaaaatcaactcttggtaactggatgaacgaaatacgtcgattttgc
cctgtcttgcgtgctgtgaagtttcttgggaatcctgaggaaagaagatacatccgtgag
gagctactggttgctgggaagtttgatgtctgtgtcacaagttttgaaatggccatcaag
gagaagtctgctttgcgtcgttttagttggcgctatataattattgatgaagcccatcga
atcaagaatgagaattcacttctttcaaaaacaatgagactctacaatactaattaccga
cttcttattactggcactccactccagaataatctccatgagctttggtctcttcttaac
tttttactgccggagatttttagttcagctgaaacttttgatgagtggtttcaaatttct
ggtgaaaatgaccagcaggaagttgttcaacaacttcacaaggttcttcggccatttctc
cttcgtagattgaaatcagatgttgagaaaggtttgcctcccaaaaaggaaactatcctg
aaagtaggaatgtcccagatgcagaaacagtactatagggctttgctgcaaaaggatctt
gaagttgtaaatgctggtggagagcgtaagcgtcttctgaacattgcaatgcagctgcgc
aaatgttgtaatcacccataccttttccaaggtgctgaacctggacctccatatacaaca
ggagaccatcttgttaccagtgctggtaaaatggttctcttggacaaattacttccaaag
ctgaaggagcgtgattctagagttctgatattttcacagatgacaaggctactggatatt
cttgaagattatttgatgtttcgtggataccagtattgtcggattgatggtaatacaggt
ggtgaagatcgtgatgcttccattgaagcctttaataagccaggaagtgagaaatttgtt
ttcttgttatcaactagagctggaggccttggtattaatcttgctacagcagatgttgta
atcctttatgatagtgactggaacccacaagttgatttgcaagcacaggatcgggcccat
agaattggtcaaaagaaggaagttcaagtgttccgcttttgcacagagtacactattgag
gaaaaggtgattgagagggcctataaaaagcttgctctagatgctctggttattcaacaa
ggacgattagctgagcagaagactgttaacaaagatgagttgcttcaaatggtgaggttt
ggtgctgaaatggtcttcagctccaaggatagcacaattacggatgaagacattgataga
atcattgccaagggagaagcagcgacagcggaacttgatgccaagatgaagaaatttact
gaggatgcaattaaattcaagatggatgatactgctgaattgtatgaatttgatgatgac
aaggatgagaacaagtttgacatcaagaaaattgtaagtgaaaactggattgagccccca
aaaagagagcggaagcggaattactcagaatctgagtactttaaacaaaccttgcgccaa
ggtggtccagcaaaaccgaaggagcctcggattcctcgcatgcctcaattgcttgatttc
caattcttcaacactcagaggctaagtgagttgtatgagaaagaagtacgctatctcatg
caaacacatcagaagaatcaggtaaaggacactattgatgtggatgaacctgaagaaacg
ggagacccgctaactgctgaagagttggaagaaaaggagcgactattagaagagggattt
tcttcatggagtagaagagatttcaatactttcattagagcttgtgagaaatatggacgg
aatgatataatgagtattgcttcagaaatggaagggaagacagaggaggaagttgaaaga
tatgctaaagtatttaaagaaagatacaaggagttaaatgattatgatagaataattaag
aacattgaacgaggagaggcaagaatttctagaagagatgagatcatgaaggcaattggc
aagaaattggatcgatacaagaatccatggctggaattgaagatccagtatggtcagaac
aaagggaagttatacaatgaagaatgtgatcgattcatgatatgcatggttcacaagctt
ggttatgggaattgggaggagttgaaggcagcattccgagcgtcacccttgtttcgattt
gattggtttgtgaagtcacggaccactcaagagctggcaaggagatgtgatacccttatt
cgattggttgagaaggaaaatcaagaatatgatgagagggagcgacaagctcgcaaggag
aagaaacttgccaagaacatgacaccatcaaagcgcagtgggaagcagccgactgagagt
cctaatcaactaaagaaacggaagcagctttccatggatgataatgcgaactcggggaaa
aggaggaagtga
DBGET
integrated database retrieval system
