Gossypium raimondii: 105797028
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Entry
105797028 CDS
T04129
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3
KO
K14948
polypyrimidine tract-binding protein 2
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gra03041
]
105797028
Spliceosome [BR:
gra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
105797028
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RL
TGF_beta
Phage_tail_terminator_5
Motif
Other DBs
NCBI-GeneID:
105797028
NCBI-ProteinID:
XP_012482405
UniProt:
A0A0D2RHA4
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Position
3:complement(8923351..8929613)
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AA seq
438 aa
AA seq
DB search
MAEASKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDIPSAINAMQF
YTNVQPTIRGRNVYVQFSSHQELTTMDQNAQGRGDEPNRILLVTIHHMLYPITVEVLHQV
FSPHGFVEKIVTFQKSAGFQALIQYQGRQNAISARTSLQGRNIYDGCCQLDIQFSNLDEL
QVHYNNERSRDFTNPNLPTEQKGRSSQHPGYGDAGVGFPQMANAAAIAAAFGGGLPPGIS
GTNDRCTVLVSNLNPDRIDEDKLFNLFSLYGNIVRIKLLRNKPDHALVQMGDGFQAELAV
HFLKGAMLFGKRLEVNFSKHPNITQGTDTHEYVNSNLNRFNRNAAKNYRYCCSPTKMVHL
STLPQDVTEEEIVNHLAEHGTIVNTKLFEMNGKKQALVMFETEEQATEALVSKHATSLGG
SIIRISFSQLQTIRENSQ
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcttctaaagtcattcatgttcgcaacgttggccatgaaatttctgaaaat
gatttgcttcaacttttccagccatttggagtgataacaaagcttgtaatgctccgtgca
aagaatcaggctcttctccaaatgcaagatattccttcagccatcaatgcaatgcagttc
tacactaatgttcaaccaactatcagggggaggaatgtgtatgttcaattctcatcacat
caagaactgacaaccatggatcagaatgctcaaggacgaggtgatgagccgaatcgaatc
ctcctggtcacaatccatcatatgctttatcctattactgtggaagtgctacaccaggtt
ttctcacctcatggatttgtggagaagatcgtcacatttcagaagtcggctggctttcaa
gccctgatccagtatcaaggacgccagaatgctatctcagctagaacttctcttcagggc
cgtaatatttatgatggctgctgccagcttgatatacagttttcaaaccttgatgaatta
caagtccattataataatgagcgatcaagggatttcacaaacccaaatctcccaacagaa
cagaagggcagatcatcacagcatcctgggtatggtgatgcaggagttggattcccacag
atggctaatgcagctgcaattgcagcagcttttggaggaggtttgcctccaggaataagt
gggacaaatgataggtgcacagtgctcgtttccaatctaaatcctgatagaatagatgag
gataagctattcaacttgttctcactctatggaaacattgtgagaattaaacttctacgt
aataaaccagatcatgctcttgttcaaatgggtgatggcttccaggctgaactggcagta
cattttctcaagggggccatgctatttgggaagcgactggaggtcaatttttcaaaacat
ccaaatataacacagggaactgatacccatgaatatgtgaactcaaatctcaaccgcttt
aatcgcaatgctgcgaagaactaccgttactgctgctcccctacaaagatggttcatctt
tctactttacctcaggatgtcactgaagaggaaattgtgaaccacttggcggaacatggc
accatcgttaataccaagctctttgaaatgaatggaaagaagcaagcccttgttatgttt
gaaaccgaggagcaagctacggaagcccttgtttccaagcacgcaacctcacttggtggg
tcaataattcgaatttcattctctcagttgcagacaataagagagaactcacagtaa
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