KEGG   Gossypium raimondii: 105797102
Entry
105797102         CDS       T04129                                 
Name
(RefSeq) small RNA degrading nuclease 5
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
gra  Gossypium raimondii
Pathway
gra03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    105797102
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gra03009]
    105797102
Ribosome biogenesis [BR:gra03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    105797102
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-GeneID: 105797102
NCBI-ProteinID: XP_012482489
UniProt: A0A0D2RHL6
LinkDB
Position
3:9928529..9933559
AA seq 564 aa
MASLKEKSEEAIPEEEKKESSNYFDIYGPQAKAELVFKTPEADSTLNLQDVQGLVTWVLA
DGFMPSWVFIKNKPLIPKVVMLYVPGLDAALYIAQSMKLSGFKQSCGNPRALLALSCVSD
GMQTIDALLTCKVKRKRNVIDSARDVSQSAEQETSISSMDSAEILKDIPFPISYYTLTAK
ELEDNGFCYDQPGFIPTRPAPDGSSPYEMLALDCEMCITSEGFELTRVTLVDIKGQVVLD
KLVNPSNPITDYNTRFSGITYEMLSGVTTTLQNVQEDFLMLVHKDTILVGHSLENDLLAL
KISHDLIIDTSVLYKHPRGGSYKSALRVLAKRFLSREIQQSGSGHDSIEDARAAMDLALL
KIRNGPDFGSPPSFMRRKLLTLLGECGKTSSFIDDISIVKRYASESSHAIPVCSDDEALL
KARKEVKNDRVHFVWTQFSELNSYFRKQAEDDVKLNGKLAEMISLLTCDKKPAKRKGVKY
NISTELKEILTRIDARVRSLHTALPTNSMFIICTGHGDIAIVHRLRKMLTEQSETMIPRE
KLIKVLEELQAQAEVALCFVGMKH
NT seq 1695 nt   +upstreamnt  +downstreamnt
atggcgtctctaaaggaaaagagtgaagaggcaattccagaggaggaaaagaaggagagc
tctaattattttgatatttatggacctcaagcaaaagcagaacttgttttcaagacgcca
gaagctgacagtactttgaatttgcaagatgttcaaggacttgttacctgggttcttgcc
gatggattcatgccttcctgggtctttattaagaataagccgctgataccgaaagttgtt
atgctttatgtccctggcttggatgcagctttgtacatagctcaatccatgaaactttct
ggttttaaacaaagttgtggcaatcctcgggcacttttagcacttagttgtgtatcagat
gggatgcagacaatagacgcactcctaacgtgcaaagtgaagagaaagagaaatgtaatt
gattcagcaagggatgtaagccaatcagctgagcaagaaacatccatctcttcaatggac
tctgcagaaatcttgaaagacattcctttccccatttcatattatacgcttacagcaaag
gaactagaagacaatggattttgttatgatcaaccaggttttattcctactcgtcctgct
cctgatggatcttctccttatgaaatgttggcacttgactgtgaaatgtgtataacaagt
gagggttttgagcttacaagagtgaccctggttgatattaaaggacaggttgtactggat
aaattggttaacccatcaaaccctatcaccgattacaacacaaggtttagtggaatcaca
tacgagatgttgagtggagtgactacaactcttcaaaatgttcaggaagattttctgatg
ctggttcacaaagataccatcttagtcgggcactccttggagaatgacttattagctttg
aagatttctcatgatctgataattgatacatctgtattatacaaacaccctcgcggtgga
tcttataaaagtgctcttcgagttcttgcgaagagatttctttctcgggaaatacagcag
tcggggagtggacatgatagcattgaagatgcaagagctgctatggatttggctctgtta
aagattagaaatggacctgattttggttcgccaccatcctttatgcgtaggaagctcctt
acacttctgggtgagtgtggcaagacctcctctttcattgatgatatttccatagtgaag
cgatatgcttctgagtcatcccatgcaatcccagtttgctctgatgatgaagcactttta
aaggctagaaaagaggtcaagaatgaccgtgttcactttgtctggacacagttttcagaa
ttgaattcctatttcagaaaacaagctgaggatgacgtaaagttgaatggaaagcttgcg
gaaatgatatcattgcttacatgtgataagaaacctgccaaacgcaaaggagtaaaatac
aatatttcaactgagctaaaggaaattttaacacgcatcgacgctagggttcgtagtctc
cacactgcattacccactaactcgatgtttataatatgcaccggacatggagacatagcc
attgttcatagattaaggaaaatgctgacagagcaaagtgaaacaatgattccacgtgag
aaacttattaaggttttggaagagctgcaggcccaagctgaggtagctttatgttttgtt
ggtatgaagcattag

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