Gossypium raimondii: 105797102
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Entry
105797102 CDS
T04129
Name
(RefSeq) small RNA degrading nuclease 5
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
gra
Gossypium raimondii
Pathway
gra03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105797102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gra03009
]
105797102
Ribosome biogenesis [BR:
gra03009
]
Eukaryotic type
Pre-60S particles
RNases
105797102
SSDB
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Paralog
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
105797102
NCBI-ProteinID:
XP_012482489
UniProt:
A0A0D2RHL6
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All DBs
Position
3:9928529..9933559
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AA seq
564 aa
AA seq
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MASLKEKSEEAIPEEEKKESSNYFDIYGPQAKAELVFKTPEADSTLNLQDVQGLVTWVLA
DGFMPSWVFIKNKPLIPKVVMLYVPGLDAALYIAQSMKLSGFKQSCGNPRALLALSCVSD
GMQTIDALLTCKVKRKRNVIDSARDVSQSAEQETSISSMDSAEILKDIPFPISYYTLTAK
ELEDNGFCYDQPGFIPTRPAPDGSSPYEMLALDCEMCITSEGFELTRVTLVDIKGQVVLD
KLVNPSNPITDYNTRFSGITYEMLSGVTTTLQNVQEDFLMLVHKDTILVGHSLENDLLAL
KISHDLIIDTSVLYKHPRGGSYKSALRVLAKRFLSREIQQSGSGHDSIEDARAAMDLALL
KIRNGPDFGSPPSFMRRKLLTLLGECGKTSSFIDDISIVKRYASESSHAIPVCSDDEALL
KARKEVKNDRVHFVWTQFSELNSYFRKQAEDDVKLNGKLAEMISLLTCDKKPAKRKGVKY
NISTELKEILTRIDARVRSLHTALPTNSMFIICTGHGDIAIVHRLRKMLTEQSETMIPRE
KLIKVLEELQAQAEVALCFVGMKH
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctctaaaggaaaagagtgaagaggcaattccagaggaggaaaagaaggagagc
tctaattattttgatatttatggacctcaagcaaaagcagaacttgttttcaagacgcca
gaagctgacagtactttgaatttgcaagatgttcaaggacttgttacctgggttcttgcc
gatggattcatgccttcctgggtctttattaagaataagccgctgataccgaaagttgtt
atgctttatgtccctggcttggatgcagctttgtacatagctcaatccatgaaactttct
ggttttaaacaaagttgtggcaatcctcgggcacttttagcacttagttgtgtatcagat
gggatgcagacaatagacgcactcctaacgtgcaaagtgaagagaaagagaaatgtaatt
gattcagcaagggatgtaagccaatcagctgagcaagaaacatccatctcttcaatggac
tctgcagaaatcttgaaagacattcctttccccatttcatattatacgcttacagcaaag
gaactagaagacaatggattttgttatgatcaaccaggttttattcctactcgtcctgct
cctgatggatcttctccttatgaaatgttggcacttgactgtgaaatgtgtataacaagt
gagggttttgagcttacaagagtgaccctggttgatattaaaggacaggttgtactggat
aaattggttaacccatcaaaccctatcaccgattacaacacaaggtttagtggaatcaca
tacgagatgttgagtggagtgactacaactcttcaaaatgttcaggaagattttctgatg
ctggttcacaaagataccatcttagtcgggcactccttggagaatgacttattagctttg
aagatttctcatgatctgataattgatacatctgtattatacaaacaccctcgcggtgga
tcttataaaagtgctcttcgagttcttgcgaagagatttctttctcgggaaatacagcag
tcggggagtggacatgatagcattgaagatgcaagagctgctatggatttggctctgtta
aagattagaaatggacctgattttggttcgccaccatcctttatgcgtaggaagctcctt
acacttctgggtgagtgtggcaagacctcctctttcattgatgatatttccatagtgaag
cgatatgcttctgagtcatcccatgcaatcccagtttgctctgatgatgaagcactttta
aaggctagaaaagaggtcaagaatgaccgtgttcactttgtctggacacagttttcagaa
ttgaattcctatttcagaaaacaagctgaggatgacgtaaagttgaatggaaagcttgcg
gaaatgatatcattgcttacatgtgataagaaacctgccaaacgcaaaggagtaaaatac
aatatttcaactgagctaaaggaaattttaacacgcatcgacgctagggttcgtagtctc
cacactgcattacccactaactcgatgtttataatatgcaccggacatggagacatagcc
attgttcatagattaaggaaaatgctgacagagcaaagtgaaacaatgattccacgtgag
aaacttattaaggttttggaagagctgcaggcccaagctgaggtagctttatgttttgtt
ggtatgaagcattag
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