Gossypium raimondii: 105797107
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Entry
105797107 CDS
T04129
Name
(RefSeq) putative DEAD-box ATP-dependent RNA helicase 29 isoform X2
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gra03009
]
105797107
Enzymes [BR:
gra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105797107
Ribosome biogenesis [BR:
gra03009
]
Eukaryotic type
Pre-60S particles
Helicases
105797107
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
P-loop_SecA
Dpoe2NT
Motif
Other DBs
NCBI-GeneID:
105797107
NCBI-ProteinID:
XP_012482493
UniProt:
A0A0D2SD27
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All DBs
Position
3:10037748..10043563
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AA seq
787 aa
AA seq
DB search
MAPVDERFVSSKAELKRKQKEKKKAKSGGFESLNLSPNVYRGIKRKGYRVPTPIQRKTMP
LILAGNDVVAMARTGSGKTAAFLVPMLEKLKQHVPQGGVRALILSPTRDLALQTLKFAKE
LGKFTDLRISLLVGGDSMESQFEELAQNPDIIIATPGRLMHHLTEVDDMTLRTVEYVVFD
EADSLFGMGFAEQLHKILTQLSENRQTLLFSATLPSALAEFAKAGLRDPQLVRLDLETKI
SPDLKLVFFTLRQEEKHAALLYLARDHISSDQQTLIFVSTKHHVEFLNIMFREEGIEPSV
CYGDMDQDARKINISKFRSRKTMLLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVG
RAARAGRTGTAFSFVTSEDMPYLLDLHLFLSRPIRAAPTEEEVFQDMDGAMNKIDQAIAN
GESVYGRFPQNIIDLISDRVRDMIDSSAELNNLQRTCTNAFRLYSKTKPLPARESIKRAK
DLPREGLHPIFRNVLEGGELAALAFSERLKAFRPKQTILEAESEAAKSKHSQWVDVMKKK
RDMHEKIINLVHKQRFSNHVEKETEPDITSSKINDTKEARGSKRKARSFKDEEYYISSVP
TNHHTEAGLSVRSNEGFGSNRLESAVLDLVADDSEGLQKQKSRYHWDKRGKKYVKLNNGE
RVTASGKVKTESGAKIKTEKTGIYKKWKERSHKKVYLKGTTNGENGEATTISSGDYRSRG
NGRNFRGNKKSQHSVPNAHVRSEIKDFNQVRKERQKKANNKLSYMKGKANKKKGKNFGKS
GKRGKSK
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggctccggtagacgagcgttttgtaagctccaaagcggagcttaaacgaaaacagaag
gaaaaaaagaaggcaaaatctggtggcttcgagtccttaaacctaagccctaatgtctac
agaggaatcaagcggaagggatacagagtccctacgccgattcaacgcaagaccatgcct
cttattcttgctggaaacgacgtcgttgccatggcccggactggttctgggaagacggcg
gcttttttggtccccatgctggagaaactgaagcagcacgtgcctcagggcggtgtccga
gctctcattttgtctccgaccagagatttggccttgcagactttgaagtttgccaaggaa
ttgggaaaatttacagatcttcggattagtttgcttgtcggcggtgatagcatggaaagt
cagtttgaagagttggcacaaaaccctgatattattattgctactcctggtagactgatg
caccatctaactgaggttgatgatatgacacttcgtacagtggaatatgtggtatttgat
gaagcagattccctctttggcatgggttttgctgaacagttgcataaaattcttacccag
cttagtgaaaaccgtcagaccttgctctttagtgcaaccttaccaagtgccctagcagag
tttgctaaggctggtctgcgagaccctcaacttgtgcgtcttgatttagaaaccaagatt
agccctgacttaaagcttgtttttttcaccttgcgtcaggaagaaaaacatgccgcactg
ttgtatttggcaagggaccacattagttctgatcaacaaactttgatatttgtttccact
aaacatcatgtagagttccttaatattatgtttcgagaggagggtatcgagccttctgtg
tgttatggtgatatggatcaagatgctcggaaaattaatatttcaaaattcagatcaaga
aaaactatgttgcttattgtgacagacgttgctgctaggggtattgacatacctttacta
gataatgttattaactgggacttccctccgaagcccaaaatttttgttcatcgtgttgga
cgagcagcaagggcaggtaggactggaactgcattttcctttgtgacatctgaggatatg
ccataccttttagatcttcatctatttctgtcaagaccaatcagggcggcacctactgaa
gaggaggtttttcaagatatggatggggcaatgaataaaattgatcaagcaattgcaaat
ggagaatctgtttacggacgtttcccccaaaacattattgatcttatatcagatagggtt
agggacatgattgattcatctgcagaactaaataatttgcagaggacatgtacaaatgct
tttcgtctgtattccaagactaaaccattgcctgcaagggagtccatcaaaagggcaaag
gatttgccccgtgaaggcttgcatcctatctttagaaatgtactggaaggaggtgaattg
gcagcacttgcgttttctgaacgtctgaaagcttttagacccaagcagaccattctggaa
gctgaaagtgaagccgctaaatcaaagcattctcagtgggtcgatgtgatgaagaagaag
agagatatgcatgagaagatcattaatttggttcataagcagcgctttagcaatcatgtg
gaaaaggaaaccgaacctgacattacttcttcaaagataaatgacacaaaagaggctcgt
ggttctaaaagaaaggcaaggagcttcaaggatgaggagtattacataagttctgtgcca
acaaatcatcatacagaggctggtctctcagtaagaagtaatgaagggtttggatcaaat
aggttggagtctgctgtactggatcttgttgctgacgatagtgaaggtttgcagaaacaa
aaatccagatatcattgggataagaggggtaaaaagtacgtcaaattgaataatggtgaa
cgtgttacagctagtggaaaggtgaagacagagagtggtgccaaaataaaaactgagaaa
acaggaatttacaagaagtggaaagaacgatctcacaaaaaggtatatttgaagggaacc
accaacggagagaatggtgaggcaacaacaatttcgtcaggagactatcggtcacgaggt
aatggtagaaacttcagagggaacaagaaatcgcagcattctgtgcctaatgctcatgta
cgttcagagatcaaagatttcaatcaagtgcgaaaggaaagacagaagaaggcaaataat
aaactgtcatatatgaagggcaaagccaacaagaaaaagggtaaaaatttcggtaaaagt
ggtaaaagaggaaagtccaagtag
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