Gossypium raimondii: 105797153
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Entry
105797153 CDS
T04129
Name
(RefSeq) SWI/SNF complex subunit SWI3C
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
gra
Gossypium raimondii
Pathway
gra03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105797153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gra03021
]
105797153
03036 Chromosome and associated proteins [BR:
gra03036
]
105797153
Transcription machinery [BR:
gra03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105797153
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105797153
PBAF complex
105797153
GBAF(ncBAF) complex
105797153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Zn_ribbon_2
Motif
Other DBs
NCBI-GeneID:
105797153
NCBI-ProteinID:
XP_012482545
UniProt:
A0A0D2N9M6
LinkDB
All DBs
Position
3:complement(11161143..11167060)
Genome browser
AA seq
738 aa
AA seq
DB search
MPASSSDGRGRWKRRKRERRLKHQVEEKDVVPEEDDEEENNDDLDNSGDDAAGVATDPSL
PGSSESEVLAGGGFRISEFPPVVKRTVNRPHGSVMAIVASERAGLIGDSKGHQQVELAVL
ENVSHGQIQSVSMEAPVVDPEKYVITPPPIMEGRGVVKRFGSRVHVLPMHSEWFSPATVH
RLERQVVPLFFSGKSPEHTPERYIECRNQIVVKYMDNPGKRITVSDCQGLVNGINNEDLT
RIFRFLDHWGIINYCAAAPSHEPWKVGSYLREESNGEVHVPSAALKSIDSLIKFDKPKCR
LKAADVYSPLSCNDNDVSDLDNRIRERLSENYCSSCSQPIPTSYYQSQKEVDTLLCSDCF
HDGRFFSGHSSIDFVRVESKDYGDLDGESWSDQETLMLLEALEIYNENWNEIAEHVGTKS
KAQCILHFLRLPMEEGLLEDMEVPSMPKSMIVSNGDGRGILHSNMNGSLTGPNLQDADSE
SRLPFANSGNPVMAMVAFLASAVGPRVAAACAHASLAALSEGENSATNGSVGQNEAEVHP
LPPEKTKAAAKAGLAAAAMKAKLFADHEEREIQRLSANIINHQLKRMELKLKQFAEVETL
LMKECDQVEKTRQRFAAERARIVSTRFSPVGVTSQMSLPGVASSMANNNISNNRQQVIST
SPSHPQPSVSGYGGNQPVNPHVPFMQRQPMFPMGPRLPLTAMQASTSGSPNVMFNSPGNT
QPTINHPLMRSASGTSSG
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcttcttcttcagatggtcgaggtagatggaagcggcggaagcgagagcgaaga
ttgaagcaccaggtggaagaaaaggatgtggttccggaggaagacgatgaagaagagaac
aacgatgaccttgacaactccggggacgatgccgccggtgtcgccacggatccatcctta
ccgggctccagcgagagtgaggtcctggccggcggtggatttcgcatctcagagttccct
cccgtggtgaagagaaccgtgaaccgtcctcacggttctgtaatggcgatcgtggcatct
gaacgggcgggtttgattggggatagtaaggggcatcagcaggttgagctggcggttttg
gagaatgtttcgcacgggcagatacagtcggtttctatggaagctcccgttgttgatccg
gagaagtatgtgatcacccctcctcctataatggagggtcgtggtgttgttaagaggttt
gggagtagggttcatgtcctgccaatgcattcagagtggttttcaccagccacagtgcat
cgtctagaaagacaagttgtgccacttttcttctctgggaaatcacctgaacacacgcca
gaaagatatattgaatgtagaaaccaaatagttgtcaaatacatggataatcctgggaag
agaattacagtttctgattgtcaggggttggtaaatggtatcaataatgaggatttaact
cggatttttcggtttcttgatcactggggaatcatcaattattgtgcagctgcaccaagt
catgagccatggaaagttggatcctacttaagggaggaatcaaatggtgaggttcatgtg
ccatcagctgctttaaagtctattgatagtttgatcaaatttgacaagccaaaatgtagg
cttaaggcagcggatgtttattccccattgtcatgtaatgataatgatgtctctgacttg
gacaacagaatacgagagcgcttatctgaaaactattgtagttcttgttctcagcctatt
cccacctcatattatcagtctcaaaaggaggttgatacgctactttgttctgattgcttc
catgatgggagatttttttctggtcattcaagcatagattttgttagggtagagtcaaaa
gattatggtgacctagatggagaaagttggagtgatcaggaaacgctaatgctgcttgag
gcattggaaatttacaatgagaactggaatgaaatagctgagcatgttggtactaagtca
aaagcacaatgcatacttcattttttacgtctacccatggaggagggtctattggaagat
atggaagtcccaagcatgcccaaatcaatgattgtttcaaatggagatggccgtggaata
ttgcactcaaatatgaatgggagtctaacagggcccaaccttcaagatgcagattccgaa
agcaggcttccttttgcgaattctgggaatccagtaatggctatggttgcttttctggcc
tctgctgttggacccagagttgctgcagcttgtgcccatgcatcattggcagctttgtct
gaaggtgaaaactcagcaacaaatggatctgttggtcaaaatgaggcggaggttcatcca
ctacctccagaaaaaactaaagctgctgccaaagctggtcttgctgcagcagctatgaag
gcgaaactatttgcagatcatgaggaacgagaaattcaaagactgtcagctaatatcata
aaccatcagttgaagagaatggagctgaagctgaagcagtttgcagaagtagaaacctta
ctcatgaaagaatgtgaccaagtggagaaaacaaggcaaaggtttgctgcagagagggcc
cgcattgtatcaactagattcagtcctgttggtgtcacatcacaaatgagtcttcctggt
gttgcttcttccatggctaacaataacatcagcaacaacaggcaacaggtaatttcaact
tcgccttcacacccacaaccaagtgtttctggatatggcggcaaccagccagtaaatccc
catgtgccattcatgcaacgtcaaccaatgtttccgatgggcccaaggttgccccttaca
gccatgcaggcatccacttcagggtctccaaatgtcatgttcaactccccggggaataca
caacccactattaaccatccattaatgaggtcagcatccgggactagctctggttaa
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