Gossypium raimondii: 105797371
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Entry
105797371 CDS
T04129
Name
(RefSeq) heparanase-like protein 2
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
gra
Gossypium raimondii
Pathway
gra00531
Glycosaminoglycan degradation
gra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
105797371
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gra00536
]
105797371
Enzymes [BR:
gra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
105797371
Glycosaminoglycan binding proteins [BR:
gra00536
]
Heparan sulfate / Heparin
Enzymes
105797371
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
105797371
NCBI-ProteinID:
XP_052476806
LinkDB
All DBs
Position
9:complement(898782..901209)
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AA seq
525 aa
AA seq
DB search
MDLKCIFSLVIIVSRISLSFTQNVNVVIQGSTSVAETDDNFVCATLDWWPTEKCNYNQCP
WGKAGLLNLDLKRKVLINAIKAFNSLRIKVGGSLQDQVVYGVGEVKNCPNFMKKEGSLFG
FSQGCLPVERWDELNNYFNQTGVNVIFGLNALLGRNESQSEKGLWVGDWNLQNARNLMKY
TISRGYKVDSYEFGNQLSGAGMGAWVEAEQYGKDVIVLKNMVKELHPDPKTQPKVLGPSG
FYDEKWFNSFLKVSGQEVVDGVTHHIYNLGPGDDLNLITKIQDPSYLNQVAQTYRGAFNI
VNKFKPQSGAWVSESGGALQGGAKDVSPTFADGFWYFDQLGMASTYNHKVFCRQTLIGGN
YALLDTTTFIPNPDYYGALLWHRIIGSIALAVTQESNPNLRVYAHCAKKKPGISIIFINL
SNDSTFDVTLSRYEHRRRNLRPTDAAKPNFEFTSHLNREEYHLTALGGNIQGQIVLLNDV
PMVLTDTFDIPAMDPKLVNASTPISVAAHSIVYVTIRDFHAPVCV
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggatttgaaatgcatattcagcctagtaataattgtttctcggatatcgctttctttt
acacaaaatgtgaacgtggtgattcaaggatcaacatcggttgctgaaacagatgataac
ttcgtatgtgctacactggattggtggcctactgaaaaatgcaactataatcaatgtcct
tggggaaaggctggacttttaaatttggatttgaaaaggaaggtgctaataaatgcaata
aaagcattcaattctttaagaatcaaagttggggggtcgttgcaagatcaagtggtgtac
ggagtaggagaagttaagaattgccccaatttcatgaaaaaagaaggcagtttatttggg
ttctcccaagggtgccttcccgtggaaagatgggatgaactgaataactatttcaatcaa
actggagtaaatgttatattcgggttgaatgctcttctgggaagaaacgagtcacaaagc
gaaaagggtctttgggttggcgattggaatttacaaaatgcaaggaatttgatgaagtat
actatttccaggggatacaaagttgattcttacgaatttggaaatcaactctccggagct
gggatgggcgcatgggttgaggctgaacaatatggaaaagacgtaatagtacttaagaat
atggtgaaagaattacacccagatcccaaaactcaaccaaaggttctaggccctagtggc
ttctatgacgagaaatggtttaattccttcctaaaagtttcgggacaagaagttgttgac
ggggttacgcaccacatctacaatctcggacctggtgatgatctaaacttgattaccaag
attcaagatccttcgtacttgaatcaagttgcccaaacctataggggtgcttttaatatt
gttaacaagtttaaaccgcagtcgggagcttgggtttctgaatctggtggagctcttcag
ggcggtgctaaagatgtgtctccaacctttgctgatggattttggtattttgatcaatta
ggaatggcttcaacctacaatcacaaggttttctgcaggcaaactctcatcggcggaaat
tatgctttacttgacactacaacatttattcccaatcccgattactacggtgcgcttcta
tggcaccggattataggaagtattgcacttgccgtaactcaagagtctaaccctaatttg
cgtgtatatgctcattgtgcgaagaaaaagcccgggatttctataatttttatcaacttg
tcgaacgacagcacattcgacgtaacgctttcacgttacgaacatcgtcgtcgtaatttg
agacccacggatgctgcgaagcctaattttgaatttacgagtcacctgaatagggaagag
tatcatctgacagcattaggtggaaatatacaaggtcaaatcgtgttgctgaatgacgtt
ccaatggttctgacagatacattcgacattccggcgatggatccaaagcttgtcaatgct
tccacacccatctcggttgcagctcattccatagtctacgtaaccatcagggactttcat
gcccctgtctgtgtttaa
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