Gossypium raimondii: 105797376
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Entry
105797376 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105797376
KO
K14794
ribosomal RNA-processing protein 12
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gra03009
]
105797376
Ribosome biogenesis [BR:
gra03009
]
Eukaryotic type
90S particles
Other 90S particles
105797376
Pre-60S particles
Other pre-60S particles
105797376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
TOR1L1_N
INTS1_R4
Hemerythrin
DUF7097
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
105797376
NCBI-ProteinID:
XP_012482837
UniProt:
A0A0D2PTE6
LinkDB
All DBs
Position
7:51928043..51934568
Genome browser
AA seq
1264 aa
AA seq
DB search
MEALDFFPDSPTGDFCDSVLRHFSKSDQEDSQRLCATVGAMTQELKEQNLPLSPIAYFGA
TCSSLDRLGSEPDSPPHVVQSLATVLSLLLPRIPVAILKKKGDFVSRMVVTVLRLNSVTE
VTLTSGLKCLAQLLIAGDKVNWSDLSQNYGVLIGYLTDSRSKVRRQSHLCIRDVLQSLRG
TPVLAPASEAISNLFERFLLLAGGSNANSSEGVKGAQEVLYVLDALKDSLPLMSMKYMTT
ILKYYKTLLELRQPLVTRRVTDSLNVVCTYPNIEVSAEALLDLLSFLAVSVSASEASPVS
LTFNARLLSSGMMKVQSLNRQLCVIKLPIVFSALKDILGSEHEEAIFSATEAFKTLIDGC
IDEGLIKQGVDQIIHAQSDDRKSGPTIIEKVCAIIESLLDYHYSVAWDMAFQVVSTMFDK
LGYYSSYFMKGTIKNLADMQSLPDEDFPYRKQLHECVGSALGAMGPETFLGILPLNFQAN
DLSEVNVWLFPILKQHIVGARLGFFCETLLGLVEEMKQRSRRLGLEGKVFSSRSADALVY
SVWSLLPSFCNYPLDTAKSFKDLLKPICSALDEEHDIRGIICSSLQILIQQNKRIKEGKD
DADSAEICPAKQRAISHYTPEIAGENLNVLTASAPQLLKLLSGIFMKSTVDEGGSLQSTI
GEFASIAHKNVVRTLFKNTMERLLEVTQQAGVAEASNMQVDNSSSKSSLFLKRARLIDLA
VSLLPGLDEPALNLLFIAIKPALQDVDGLIQKKAYKVLSIILRNQKGFLSAKLEELLKLM
IEVLPSLHFSAKRHRLDCLYELITHASKVDPNLRRHEILSSFLTEIILALKEANKKTRNR
AYEVLVQIGHEYGDQDDGGQREHLFNMVARGLAGETPHMISAAVKGLARLAYEFSDLVSS
AYKLLPSTYLLLQRKNREIIKANLGLLKVLVAKSQAEGLQAHLASLVEGLLKWQDDTKNH
FKAKVKLLLEMLVRKCGIDAVKAVMPEEHMKLLTNIRKIKERKEKKQAVSSVESKSHLSK
ATTSRLSRWNHTKIFSDFGDDDTDDSDVEMASGQKSKASSKLKSKASTLRSKKTRRAEKS
LPEDLLDQLEDEPLDLLDRHKTRSALRSSSNLKRKQDSDDEPEFDPEGRLIINEGRKPKK
VAASDADSDRRSEAPSHFSVGSSRNNQKRRKTSESGWAYTGSEYASKKAGGDVKRKDKLE
PYAYWPLDRKMMSRRPEHRAAARKGMASVVKMTKKLEGKSTSTALSSKFIKSRKIQKKGG
KRKR
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atggaagccttggacttcttcccggactcgcccaccggtgatttctgcgactcagtactc
cgccacttctcgaaatccgaccaagaagacagccaacgcctctgcgccaccgttggcgca
atgactcaagaactgaaggaacaaaatctgcctctctcaccgatcgcctacttcggcgcc
acgtgttcttctctcgaccgcctaggctccgaaccggactcccctcctcatgtcgtccag
tctctcgccaccgtcctctctcttcttctcccccgtatccccgtcgccattttgaaaaag
aaaggagatttcgtttcgagaatggtcgtgacggtattgagattgaattccgttacggag
gtcacgctgacgtcaggtttgaaatgtttagctcagttattgattgctggagataaagtt
aattggtctgatttatcgcaaaattacggggttctaatcggatacttaaccgattcccgc
tctaaggtgagaaggcaatcgcatttgtgtatccgtgatgttttacaaagcttgagaggg
acaccggtgctggcacctgcgagtgaagctatatcaaacttattcgagaggtttcttctg
ctcgccggcggttcaaatgcgaattcgagtgaaggggttaaaggagctcaggaagttctc
tatgttttggatgctcttaaggactctcttccacttatgtcgatgaaatacatgactaca
attcttaaatattataaaactttattggaacttcggcaacctcttgttactaggcgtgta
actgatagtttgaatgtggtttgtacttatccgaacatagaggtttcggctgaggcattg
ctggatttgttatcgtttttggctgtatccgtctctgcaagtgaagcttctccagttagc
ctgacgtttaatgctcgtttgttgagttctggaatgatgaaagtgcagtctcttaacagg
caactttgtgtgattaaactccccattgtgttcagtgcactcaaagatattctggggtcg
gaacatgaagaggctattttttctgctacggaggctttcaagacgctgatagatggctgc
attgatgagggtttgatcaaacagggagtggatcagattattcatgcacaatctgatgat
agaaagtcagggccaactataattgagaaagtttgtgcaatcattgagagcttacttgat
tatcattatagtgtggcgtgggatatggcatttcaagttgtttcaaccatgttcgataaa
ctagggtattactcttcatattttatgaagggaactattaagaacttggctgacatgcaa
agcttgccagatgaagattttccttacagaaaacagttacatgaatgtgttggatctgct
ctaggtgcaatggggcctgagacatttttaggaattttgccgctgaattttcaggctaat
gacctttcagaagtaaatgtgtggctgttcccaattctgaagcagcatattgtaggtgca
cgtttgggcttcttttgtgagacacttttgggtctggttgaagaaatgaagcagagatct
cggaggcttggactagaaggaaaggttttctcatcaagaagtgcagatgctcttgtatac
tcagtgtggtccttgttgccgtctttttgtaattatcctttggatactgccaaaagcttc
aaggatcttctaaagccaatatgcagtgcccttgatgaagaacatgatattcgtggaata
atatgctctagtttgcagattctgattcaacaaaataagagaattaaggaaggaaaagat
gatgcagacagtgctgaaatatgtcctgccaaacagcgagcaatatctcattatacccca
gagatcgctggggaaaatttgaatgtgctaactgcatctgctccacagttattgaaactt
ttgtcaggaatcttcatgaaatctaccgtagatgagggtggttctttgcagtccacgatt
ggggagtttgcttccatagcacataagaacgttgtcagaaccttatttaaaaacacgatg
gaaaggcttttagaagtcacgcaacaggctggggtagctgaggcatcaaatatgcaggtc
gataattcatcatctaaaagctcattatttctcaaaagggcacggttaattgacctggca
gtgtcacttttgcctggtttagatgagccagcattaaatctcttattcattgcaataaaa
cctgcattgcaggatgtggatggcttgattcagaagaaagcttacaaagttctttcaata
attctcaggaaccaaaaaggatttctatctgccaaactggaggaattgcttaaacttatg
attgaagtattgccatcattgcacttttctgccaaacgtcacagactcgactgtttgtat
gagctgataacccatgcctcaaaggtggatccgaacctgaggagacatgagattcttagt
tctttcctgactgagataatccttgctttgaaagaggctaataagaaaactagaaataga
gcttatgaggtccttgtccaaattggccatgaatatggagatcaagatgacggtgggcag
agagaacatctgtttaatatggttgctagaggtttggctggagaaactcctcatatgatt
agtgctgctgtgaaaggcttggctcggttggcttatgagttctctgatcttgtttcttct
gcttacaagttgcttccttccacatatcttctccttcaaagaaagaacagagaaattatt
aaagctaatttaggtttgttgaaagtgttggtggccaaatcacaagctgaaggcttgcaa
gcacacctggccagcttggtggaaggcttgttgaagtggcaagatgataccaaaaatcat
tttaaagctaaggttaagcttcttctggaaatgctagttaggaaatgtggtatcgatgct
gtgaaggctgtgatgcctgaagagcacatgaagctccttactaacatacgaaagatcaaa
gagaggaaagagaagaaacaggctgttagctctgtggaaagtaaatctcatctgtcaaag
gcaacaacttccaggcttagcagatggaatcatacgaaaatattctctgattttggtgat
gacgatacagatgatagtgatgtggagatggcttctggccaaaagagcaaagcttcctcg
aagttgaaatcaaaagcatctacacttcggtccaagaaaacccggagagcagagaagagc
ttgcctgaggacttgcttgaccagttagaagacgagccactagacttgcttgatcggcat
aaaacaagatctgcacttcgatcgtcttcaaatctcaagcggaagcaagattccgacgat
gaaccagagtttgaccctgagggacgcttgataattaacgagggaaggaagccaaagaag
gttgcagcatcagacgcggattcagatagaagaagtgaagcgccaagtcatttctcggtt
ggctcttcaagaaacaaccagaagagaaggaaaacatcagagtctggatgggcatacacg
ggaagtgagtatgctagcaagaaggctggtggggatgtaaagaggaaggataaacttgaa
ccatacgcatattggccccttgatcgtaagatgatgagccgtaggccggaacatcgggca
gctgctaggaaaggcatggcaagtgtggtgaaaatgacaaaaaagcttgaaggtaagagt
acctcaactgcactctcttctaaattcataaagtcaaggaagatccaaaagaaaggtggc
aagcgaaaaaggtga
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