KEGG   Gossypium raimondii: 105797424
Entry
105797424         CDS       T04129                                 
Name
(RefSeq) probable polygalacturonase At1g80170
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
gra  Gossypium raimondii
Pathway
gra00040  Pentose and glucuronate interconversions
gra01100  Metabolic pathways
Module
gra_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:gra00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    105797424
Enzymes [BR:gra01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     105797424
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim zf-DNA_Pol
Other DBs
NCBI-GeneID: 105797424
NCBI-ProteinID: XP_052477101
LinkDB
Position
9:complement(6274207..6276404)
AA seq 421 aa
MATLKIFFFVLLIQCTVFTGSSRQLKKSNINIDSYGDNTFNVISFGAIGDGKKDDSKGFK
RAWDAACDSSTPSPTFLVPQGKTFLLQPLTFNGKHCNSNNITFQIDGRIIAPTKPSTWEC
NTNCHHWIGFQNFDGLHIQGSGIINGQGDNWWKLSCKDNQKSCQLRKPTGFMIGHSKNVD
MKGLTFEDSPKMHIAFEDSTSIHATQLTIKAPGNSPNTDGIHIQRSTNVSIHNTTIQTGD
DCISVGDGSKYISITNIECGPGHGISIGSLGIMGKTEEVEFVHVRNVSFHGTTNGVRIKT
WQGGHGHARNIRFEDITSHASTRPIVIDQYYCPHKQCKNQTTAVEISNIAYENINGTSHK
ETAVQLSCSESSPCRNITMKNINLRNEKQKGKTSSYCLNAHGLRNGRVHPNVPCLDKHDN
F
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggcaactttgaaaatcttcttctttgtccttttgatccaatgcactgtattcactggc
tcttctcgtcagttgaagaagagcaacataaatattgatagctatggtgacaatacattc
aatgtcattagctttggagctattggggatggaaagaaggatgattctaaggggtttaag
cgtgcatgggatgctgcttgcgattcatcaactccgtcaccaacctttcttgtacctcaa
gggaagacgtttctgctgcaacctttaactttcaacggcaaacattgcaactctaataac
attactttccagattgatgggagaatcatagccccaaccaaaccttctacatgggaatgc
aatacaaattgtcaccattggattggctttcagaatttcgatggtctccacattcaagga
tctggtatcatcaatggccagggagataattggtggaaactttcttgcaaagataaccaa
aagtcgtgccaacttcggaaaccaacgggttttatgataggacactccaagaatgtagat
atgaaaggtttaacctttgaagacagtcccaaaatgcacattgcatttgaagactctact
tcgattcatgccactcaacttacaatcaaagctccgggaaacagccccaacactgatggc
attcacatccaacgttccaccaatgtctctatccacaatacaaccattcaaactggtgat
gattgtatatcagttggagatggctccaaatatatcagtatcactaacatcgaatgcggt
ccgggtcacggaataagcattgggagccttggaattatggggaaaactgaggaagttgaa
tttgttcatgtaagaaatgtttctttccatggaacaactaatggagttagaatcaaaact
tggcaggggggacatggtcatgcgaggaacattagatttgaagatataacttctcatgct
tcaactcgacctattgttatcgatcaatattattgccctcataaacaatgcaagaatcaa
acaacagctgtggagattagcaacatagcttatgagaacatcaatggcacatcacataaa
gaaacagcagtgcaactttcgtgcagtgaatccagtccttgtagaaacattaccatgaaa
aatattaacttgagaaatgagaagcaaaaaggcaaaacttcatcatattgcctcaatgct
catggcttgagaaatggaagggtccatcctaatgtaccttgtttggacaaacatgataat
ttctag

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