Gossypium raimondii: 105797519
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Entry
105797519 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105797519
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105797519
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gra04812
]
105797519
Enzymes [BR:
gra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
105797519
Membrane trafficking [BR:
gra04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
105797519
Cytoskeleton proteins [BR:
gra04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
105797519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
AAA_5
RuvB_N
NPHP3_N
AAA_14
AAA_22
Mg_chelatase
AAA_16
TIP49
DUF815
AAA_2
RNA_helicase
MIT
AAA_25
IstB_IS21
nSTAND3
AAA_24
Guanylate_kin
TniB
DUF4368
Motif
Other DBs
NCBI-GeneID:
105797519
NCBI-ProteinID:
XP_012482936
UniProt:
A0A0D2Q046
LinkDB
All DBs
Position
7:28767488..28772514
Genome browser
AA seq
483 aa
AA seq
DB search
MSFIKDIIDSLSSIISTDSTPYESTQKPSSSTCQNMEGIAGNERTAYKLKGYFDLAKGEI
DKAVRAEEWGLVDDALIHYKNAQRILIEASSTPTPSYISSSEQEKVKSYRQKISKWQGQV
SERLQVLSRRSGSTSANKNTLTHAQTAAVSPRASNSRRDVFQKSPRNPVVRNQVDKVGSS
KSAQESANGYESKLVEMINTAIVDRSPAVKWDDVAGLEKAKQALMEMVILPTRRRDLFTG
LRRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTSKWVGEGEKLVRTLFMVA
ISKQPSVIFMDEIDSVMSTRLANENDASRRLKSEFLIQFDGVTSNPNDLVIVIGATNKPQ
ELDDAVLRRLVKRIYVPLPDENVRRLLLKHKLKGQEFSLPGRDLEQLVRETEGYSGSDLQ
ALCEEAAMMPIRELGSNILTVKANQVRPLRYEDFQKAMSVIRPSLNKSKWEELEQWNQEF
GSN
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcatcaaagacataatcgactctctaagctcaatcatctcaaccgatagcacg
ccatatgaatcaacgcaaaagcctagttcgtccacgtgtcagaacatggagggaatagct
ggaaacgaacgcaccgcgtataagctcaaaggatacttcgatttggccaaaggagagatc
gacaaagcggttcgagcggaagaatggggtttagtagacgacgccctgattcactataaa
aatgcacagcgaattctgatcgaggctagctccactcccacaccttcatatatcagctct
agtgaacaagaaaaggtgaaatcgtataggcaaaagatatcgaaatggcaaggtcaagta
tctgagagactacaggttttaagtcgccgatcaggtagcacatccgctaacaagaacacc
ttaactcatgcacaaactgctgcagtttcaccaagagcatcaaattctaggagagatgtg
tttcaaaagtctcctcgtaacccggtggtgagaaatcaggttgataaagttggaagttcg
aaatctgctcaagaatctgctaatggttatgagtcgaagttggttgaaatgatcaataca
gcaatagttgatagaagccctgctgttaaatgggatgatgttgctggcctagaaaaggct
aagcaagcactgatggaaatggttattctgccaactagaaggcgggacttgttcactgga
cttagaaggccagctagaggtctgcttctttttggtccacctggtaatgggaagaccatg
cttgccaaagcagttgcatctgaatcacaggcaacattcttcaatgtttctgcatcctct
ctaacatctaaatgggtaggagagggtgaaaagcttgttcggactctcttcatggttgct
atatccaaacagccatctgttattttcatggatgaaattgatagtgtcatgtcaaccagg
ttggcaaatgaaaatgatgctagtagacggttgaagtcagagtttttaatccagtttgat
ggagtgacatccaatcctaatgatttagtaattgtcattggtgccactaataagcctcag
gaattggatgatgctgttcttagaagattggttaagaggatatatgtacctcttccagat
gaaaatgttagaagactgcttctaaaacacaaactcaagggtcaagaattttccttacct
ggtcgggacctagaacaacttgtgagggagacggaagggtattctggaagtgatctgcaa
gcattatgtgaagaagcggctatgatgccaattagagagcttggttcaaatatacttact
gtgaaggcaaatcaggtgagacctctaagatatgaagactttcagaaggcaatgtctgtt
atcaggcccagtttaaacaaaagcaagtgggaagaacttgaacaatggaatcaggagttt
ggctctaactaa
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