Gossypium raimondii: 105797688
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Entry
105797688 CDS
T04129
Name
(RefSeq) protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105797688
Membrane trafficking [BR:
gra04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
105797688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
105797688
NCBI-ProteinID:
XP_052489032
LinkDB
All DBs
Position
7:28236283..28244014
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AA seq
1405 aa
AA seq
DB search
MASPQFEVEDQLDEDFFDKLVNDDDDFDFTGSTGKHVVEAADFEEVKGFSNLTISETSPT
GVESGGKDIDIGTEAEKGVEDAAISELLAANEDNVAAKESSSQLPSNVKECSVMETGEEG
VLDGGTSKSDVASGIGVKEVQWSSLNSDSNVINAGGSRTFSEIFNDLGDNSEDPFAEVGN
KDDLLKEFNGSTVSVPGNSFSDLASSSHPENNDVQYYGMGLEQNVDGQEFSNYQSWENLY
PGWKYDPNTAQWYQVEGYVNTFMNSQESFGVTHSDNGDHFSDRKMDVPSLQKTTQSSVGT
LAEDFGNSNTSNWNQISQGNAEYPAHMVFDPQYPGWYYDTIALEWKMLEPYTSAVDQSAT
MDNDQQYQNKNIESYEFQALGSQDLYMNQCASASNYHQQNSNSFQDYSVSKNGRDFSSET
KQLGNIYSPADHVDNHAEQKNEFDASRLVAPYKQQSQTFLHGSEISRFQSFIPAQSYTQF
SNQTTVQPDQQMQFIPAFIDAQKSGDHPQQPLQIGTPFSSSPNEGRSSAGRPPHALVTFG
FGGKLLVMRNNSLSHTTAPYGNQGSVGGVVSVLNLVEVVMDNSNASSFGFGAQDYFQTLC
QHPLPGPLVGGNVGNRELYKWIDERIANCESSSLGYRGDVLRLLLSLLKISCQYYGKLRS
PFGTDQTSKESDCPELAIAKRLGSVKGKGVQSGLYSAVVHCFQNLPSEAQMQATALEVQR
LLVSGRKKEALEFAQEGQLWGPALVIASQLGDQFYGDTVKLMALKQLKAGSPLRTLCLVV
AGQPADVFSTVSPSSNLPGYVNTPHQPGQIAASMLDGWEENLAILTANRTKDDELVIIHL
GDCLWKERGEAAAAHICYLVAEANFEPYSDGARLCLIGADHWNCPRTYVSPEAIQRTELF
EYSKTLGNSQFLLLPFQPYKLIYAYMLAEVGKMADSLKYCQAILKSLRTGRTTEVETWKQ
VVSSLEERLRIHQQGGYYTNLAPTKLVGKLLTFFDNTAHRVVGGQPPPLSSTLHSSVHQN
EFAHQLHGSDTSNSQPTMVTRSLISSPSMESMAMPSLMPSASMEPISQWTGQTDLSAMPS
RSISEPVFGQSDRKVNSSNEANSSGTQEKAAVSSGSSRFGRFGSQLFQKTVGLVLRSRPH
HQAKLGEKNKFYYDEKLKRWVEEGAEPPAEESALPPPPTNAAFQNGVNDLSVKDTPKIEG
FHKSSENKSSISSERSSGIPPIPPSSNQYSARARMGIRSRYVDTFNKGGGSPVSLFQSPV
RSAKPVAGSSPKFFIPSTVTPAEEIVQNTGESTQEAVMTNESPATSYQQVLSPLSSTSTL
ALPPPPPPSSSSSSMQRFPSMDTIVHKSTVAASDGNSRRIASWSGSLSNASSLSTTRKEI
KPLEGTLSIPYTDPDSGEDLHEIKL
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcctcaatttgaagtggaggatcagttggatgaggatttctttgacaaattg
gtcaatgatgacgatgactttgattttactggatccaccggtaagcatgtagtagaagct
gctgattttgaggaagtaaaaggtttttctaatttgactattagtgaaacaagtcctacc
ggggttgaatctggtggaaaagatattgatattggtaccgaagctgaaaagggtgtagaa
gatgctgctatttcggaattattggctgctaatgaggataatgtggctgctaaggagagc
agttcacagctacctagtaatgtgaaagagtgcagtgtgatggagacaggagaggagggt
gtgttggatggtggtaccagtaagagtgatgtagcttcaggtattggtgtgaaagaggtt
caatggagctcgcttaactctgattcaaatgttatcaatgctggtggatctaggacattt
tcggaaatatttaatgatttgggggataattctgaggacccttttgctgaagtggggaat
aaagatgatctgctgaaggaatttaatggtagtacagttagtgtaccagggaattcattt
tctgatttggcttcgtctagtcatccagaaaataatgatgttcaatactatggcatgggg
ttagaacaaaatgtagatgggcaggaatttagcaattatcagtcctgggaaaatctttat
ccaggatggaaatatgatccaaatactgcgcaatggtatcaggtggagggatacgtgaat
acatttatgaattcacaggagagctttggtgtgacacattcagataatggcgatcatttt
tcagatagaaagatggacgtgccttctttgcagaaaacaactcagtcttctgtgggaact
ttagcagaggactttgggaattcaaatacctcaaactggaatcagatttcacaaggcaat
gcagagtaccctgcacacatggtatttgatccccagtaccctggttggtactatgataca
attgccctagaatggaagatgttggagccttatacttcagctgtagatcagtcagcaacc
atggataatgatcagcaatatcaaaataaaaatattgaaagctatgagtttcaagcttta
ggtagtcaagacctttatatgaatcagtgtgcatctgcaagcaactaccatcagcaaaat
tctaatagtttccaagattactctgtttccaagaacggaagagatttctcttctgaaacc
aaacaattaggaaacatttacagtcctgcagatcatgtagataatcatgcagagcaaaaa
aatgaatttgacgcttctagattggttgctccttataaacagcaaagtcagacttttcta
catggtagtgagatttctaggtttcaaagctttattcctgctcaaagttatacgcagttt
agcaatcagacaactgttcagccagaccaacagatgcagttcatacctgctttcattgat
gctcagaaatcaggagatcatcctcaacagccacttcaaataggcaccccattttcttct
tcacccaatgagggaaggtcttctgctgggcgccctccacatgctctagtgacttttgga
tttggtggaaaacttcttgtcatgagaaacaacagtttgtctcacacaactgcaccgtat
gggaaccagggctctgtaggaggtgtggtcagtgtactcaatttggtggaagttgtcatg
gacaacagtaatgcttctagctttgggtttggtgcccaagattactttcagacattgtgc
caacaccctttacctggtcctttggttggagggaatgttggaaatagagagttgtataag
tggattgatgaaaggattgcaaactgtgaatcttcaagcttgggctatagaggagatgtt
ttgaggttgctcttgtctttactgaaaatttcatgtcagtactatggaaaacttcggtct
ccttttggcactgaccaaacttcgaaggagagtgattgcccagagttagctattgctaag
cgtttagggtctgtgaaagggaagggagtgcaatcaggcttgtatagtgctgtcgttcac
tgcttccagaacttgccttcggaagcacagatgcaggctactgctctagaggtacagagg
cttcttgtctctggtagaaagaaggaagctttagaatttgctcaggaaggtcaattgtgg
gggccagctcttgttattgcatctcagcttggtgatcagttttatggtgatactgtgaag
ctaatggcactaaagcaattaaaagctgggtcaccattgcggacattatgcctagtagtt
gctggccaaccagcagatgtgttttccacagtttcccccagtagcaatctccctggttat
gtaaatactcctcaccagcctggacagattgcagctagcatgttggatggatgggaagag
aacttagccatcttaacagctaacagaacaaaagatgatgagcttgttattattcatctt
ggagattgcttgtggaaggagaggggtgaggctgctgctgcacacatatgctatttagtt
gctgaagccaactttgagccttattcagatggtgctagactttgtcttattggtgccgat
cattggaattgtccacgaacatatgttagccctgaggcaattcagaggacagaactattc
gagtactcaaagacacttggaaattctcagtttctcctcctaccttttcagccatataag
cttatttatgcttacatgctggctgaagttggaaaaatggctgattctttgaaatactgt
caagccattttgaagtctttgagaactggtcgaacaactgaagtggaaacttggaaacaa
gtagtgtcatctcttgaagaacgattaaggatccaccagcagggtggttactacacaaat
ttggctccaactaaattggtcggtaaattgctcacattctttgataatactgctcatcgt
gttgttggaggccaacctccacctctttcttcaacattgcatagcagtgttcatcaaaat
gaatttgctcatcagctgcatggctcagacacatccaacagtcaacctacaatggtcacg
cgatcactaatatcttctccatcaatggaatcaatggccatgccatcactgatgccttct
gcatcaatggaacccattagtcaatggactggtcagactgacctatcagcaatgcctagt
agaagcatctctgagcctgtctttggtcaaagtgacagaaaggttaattcttccaatgaa
gctaactcatctggaacacaagaaaaagcagcagtgtccagtgggtcttctcgatttggc
cgttttggttcacagctattccaaaagactgttggtttggtcctaagatctcgacctcat
caccaggctaaactgggtgagaagaacaaattttattatgatgaaaagctcaaaagatgg
gttgaggaaggagctgaacctccggctgaggaatcagctttgccacctccacccactaat
gcagctttccagaatggagtaaatgatctcagtgtaaaagatacacccaaaattgaaggc
tttcacaaaagtagtgaaaataaaagctccatctcttctgaaaggagctcaggaattcct
ccaattccacccagttcgaaccagtactctgctcgtgctcgaatgggtatccgctcaagg
tatgttgatacattcaacaagggcggaggcagccctgtaagtttattccagtctcctgtt
cgatctgcaaaacctgtggctggttcaagtcccaagtttttcatcccttctacggttacc
cctgctgaagagatagttcaaaatactggggaaagcacccaggaagcagtcatgaccaat
gaaagtcccgcaacatcttatcagcaagttttatctccactatcatcaacatcaacatta
gcactaccgccgccaccaccaccatcatcatcatcatcgagtatgcaacggtttcctagc
atggatactattgtgcacaaaagcactgtagcagcgtcagatggaaactctagacgtata
gcatcttggagtggaagcctgagtaatgcatccagtctttctactactaggaaggaaata
aaacctctagaaggaaccctaagtataccttacactgaccctgattctggggaagacctt
catgaaatcaagctttga
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