Gossypium raimondii: 105798056
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Entry
105798056 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105798056
KO
K18735
protein SMG9
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105798056
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
105798056
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NB-ARC
MMR_HSR1
ABC_tran
DO-GTPase2
MeaB
AAA_18
nSTAND3
RsgA_GTPase
AAA_29
GBP
Med6
AAA_23
AAA_28
AAA_30
AAA_22
Ploopntkinase3
AAA_16
Motif
Other DBs
NCBI-GeneID:
105798056
NCBI-ProteinID:
XP_012483394
UniProt:
A0A0D2NJP0
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All DBs
Position
9:1155302..1164734
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AA seq
403 aa
AA seq
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MAGSTSGTTSSNPSLNPSAPKILLAKPSAGPVPGKFGRGGGEDETAPHRARLPPVGSLNL
LSDSWEFHIDRFLPFLTENTDFKVVGIIGPPGAGKSTIMNELYGFDGVSPGMLPPFAIQS
EETRAMARHCTVGIEPRISAERLILLDTQSVFSPSVLSEIMRPDGSSTVSVLSGESLSAE
LAHEIMNIQLGVLLASICHILLVVSEGVHDNSMWHMMLTVDLLKHGIPDPSCITPLHSQS
STLGLQKEGKDKVHEVEEYIGTPVFVHTKLQDQDLSPPNIVQTKKALLQYFGSSSFMRRK
CANKPTDQPAMTQINTKDTELLDLLMIPYKNKDDSPEAQCESYVSSLWKLRDQVLSMNCP
SFTRNVSERDWLKSSAKIWELVKSSPIIAEYSRTLLSSGMFRR
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcgggttccactagcggaaccacttcttccaatccatcattgaacccttctgctccc
aaaatcctattagccaagccatcagctgggccggtccctggtaaatttggacgcggaggt
ggtgaagatgaaacggcgccgcatagggcccgtctccctcccgttggttccctcaacctt
ctttctgattcctgggagttccacatcgatcgatttttgccttttttgactgagaatact
gattttaaggtggttggaatcatcggtccacctggtgcaggcaagtcgacgataatgaat
gagctttatggttttgatggggtatcacctgggatgttgccaccatttgctatacagtca
gaagaaaccagagcaatggcaaggcattgtactgtaggtattgaaccaaggatttctgct
gaacggcttatactacttgatacccagtctgttttcagtccttcggttttatctgagatt
atgagacctgatggctcatccacggtttcagtactaagtggtgagtcactgtctgctgag
ttggctcatgaaattatgaatatccagcttggtgttcttctagcatctatttgtcacatt
ttgctggtggtgtctgagggagtccatgataatagcatgtggcacatgatgttgacggtt
gacttattgaaacatggcattcctgatccatcttgcataaccccgctccattcacagagc
tctacattgggtcttcagaaagagggcaaagataaagttcatgaggttgaggagtatatt
ggtacccctgtttttgtgcacacaaagctacaagatcaagacctttctccgcctaatatt
gtgcaaacgaagaaggcgcttttacaatattttggttcctcttcatttatgagacggaaa
tgtgcaaataaacccactgatcaacctgctatgactcagattaatactaaagatacagag
ttgcttgatttacttatgatcccttataagaacaaagacgactctcctgaagctcagtgt
gaaagttatgtctcctcactatggaaattacgcgatcaggttttgtcaatgaactgccct
tcgtttacacggaatgtttctgaacgtgactggttaaaaagttctgccaagatatgggaa
ttggtgaagagctcacctattattgccgagtatagcagaacattactaagttctggtatg
tttaggagataa
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