Gossypium raimondii: 105798144
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Entry
105798144 CDS
T04129
Name
(RefSeq) cyclic nucleotide-gated ion channel 2
KO
K05391
cyclic nucleotide gated channel, plant
Organism
gra
Gossypium raimondii
Pathway
gra04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
105798144
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gra04040
]
105798144
Ion channels [BR:
gra04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
105798144
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
TMEMspv1-c74-12
DUF3382
IQ
Motif
Other DBs
NCBI-GeneID:
105798144
NCBI-ProteinID:
XP_012483534
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Position
9:2722223..2727181
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AA seq
715 aa
AA seq
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MPPQSNFSLSRWFGLFQLPNSMPERSDNGSVSGEGNEENPISYTVECYACTQVGVPVFHS
TSCDQAHPPEWEASAGSSLVPIQARTASKQKKTQQPAAPNTRRPSGPFGRVLDPRTKRVQ
NWNRAFLLARAMALAIDPLFFYALSIGRGGSPCLYMDGGLAAIVTVLRTCVDAVHLFHLW
LQFRLAYVSRESLVVGCGKLVWDARAIASHYVRSLKGFWFDVFVILPVPQAVFWLVVPKL
IREEQIKIIMTILLLIFLFQFLPKVYHIICLMRRMQKVTGYIFGTIWWGFGLNLIAYFIA
SHVAGGCWYVLAIQRVASCLRQQCARNEQCKLSLSCSEEVCYQFLFPAEAVGNTCGGNST
NVIGKPLCLEVHGPFNYGIYQWALPVVSSNSVAVKILYPIFWGLMSLSTFGNDLEPTSHW
LEVMFSICIVLAGLMLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMKRRQLPSRLRQ
RVRHYERQKWATLGGEDEMELIKDLPEGLRRDIKRFLCLDLIKKVPLFHNLNDLILDNIC
DRVKPLVFSKDEKIIREGDPVQRMVFVVRGRIKRIQSLSKGVVATSLIESGGFLGDELLS
WCLRRPFIDRLPASSATFVCVEPIEAFSLDSNHLKYITDHFRYKFANERLKRTARYYSSN
WRTWAAVNIQLGWRRYRTRTRGPMISAAENGNSSDRRLLQYAAMFMSIRPHDHLE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctcagtccaacttctccctatcaaggtggtttggactttttcaacttccaaac
tcaatgccagagagatctgataatggtagtgttagcggcgaaggcaatgaagaaaaccca
atttcctacaccgtagaatgttacgcttgtactcaagtcggtgttccagtttttcactcc
accagctgtgaccaagctcacccaccggaatgggaagcctccgccggttcttccctcgtt
ccaattcaagctcgtacggcctccaaacagaagaagactcaacagcctgccgcgcctaat
actcggcgaccttctggtccgttcggtcgggtgcttgatcctaggaccaagcgagtgcaa
aactggaaccgggctttcttattggctcgtgcaatggctttagccattgatcctttgttt
ttctatgctttatctataggaagaggtgggtcgccgtgtctgtacatggatgggggcctc
gctgccatcgtaaccgtcctccgcacgtgtgtggacgccgtgcatttgttccatctttgg
cttcagttcagactggcgtacgtgtcaagggagtcgctggtcgtcggttgtggtaaactc
gtgtgggacgcacgtgccatcgcttctcattacgttcgttccctcaaaggtttctggttt
gatgtctttgtgattctgccggttcctcaggcagtattttggttagttgtaccaaaatta
ataagggaagagcagatcaagattattatgacaatactgttattaatcttcttgttccaa
ttcttgccaaaggtttaccacatcatttgcttaatgagaaggatgcaaaaggtcaccggt
tacatctttggcaccatttggtggggttttggccttaatctcattgcctacttcatagcc
tctcacgttgctggagggtgctggtatgtccttgcaatacaacgggtagcctcatgtctg
cggcaacaatgcgcgagaaacgagcagtgcaagctttcattgtcgtgctcggaggaagtg
tgctaccaattcttatttccagctgaggcagtgggaaatacttgtggtggtaactcaacc
aacgttattggaaaacctttatgtttagaggttcatggaccattcaattatgggatatat
cagtgggctctccctgttgtttctagcaattctgttgctgttaagatcctttatcccatc
ttttggggcttaatgtctctcagcacctttgggaatgatcttgaaccaacaagtcactgg
ttagaagtgatgttcagtatttgcattgtgcttgctggattgatgctctttactttattg
attggaaacattcaggtattcttgcatgctgtcatggcgaagaagaggaaaatgcagctg
agatgtcgagacatggaatggtggatgaaacgccggcaactaccatctcgtttgagacaa
cgagtccgccattacgaacgccaaaaatgggcgaccttgggcggagaagacgaaatggaa
ctgatcaaagacttacccgaaggcctccggagagacattaaacgcttcctttgccttgac
ctcatcaagaaggttcctttattccataacttgaatgatcttattctggataacatctgt
gatcgagttaagccgctcgtattctctaaagatgaaaagataattagagaaggtgatcca
gtacaaagaatggtgtttgtcgttcgtggacgtataaaacgtatccaaagccttagcaaa
ggcgtggttgccacaagtttaatcgagtcaggaggcttcctaggtgacgaattgttgtca
tggtgtcttcgccgaccatttatcgaccgtcttccagcctcgtccgcaacatttgtttgt
gtagagccgattgaagcattcagtctcgactcaaaccatctcaaatacattacagatcac
ttcaggtataaatttgccaatgagagacttaaaagaacagcaagatactattcatcgaat
tggcgaacatgggcagccgtgaatatacaacttggctggcggcgttacagaacgaggact
cgaggtccaatgatttctgctgccgaaaacggcaacagcagcgaccgccggttgctgcaa
tacgctgccatgtttatgtcaataaggccacatgatcatctagaataa
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