Gossypium raimondii: 105798164
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Entry
105798164 CDS
T04129
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X2
KO
K14948
polypyrimidine tract-binding protein 2
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gra03041
]
105798164
Spliceosome [BR:
gra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
105798164
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
105798164
NCBI-ProteinID:
XP_012483580
UniProt:
A0A0D2RVS8
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Position
9:3247070..3252815
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AA seq
460 aa
AA seq
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MSTSSQTQFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANRNQAFVE
FVDLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDTPGNVLLVTIEGVE
ANDVTIETIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIPRYLL
PGHVTSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAMEGLMQPVVGPDGKKQEP
QSNVLLASIENMQYAVTVDVLHSVFSAFGTVQKIAIFEKNGGTQALIQYPDVTTAAVAKE
SLEGHCIYEGGYCKLHLSYSRHTDLNVKAYSDKSRDYTISDLSLLATQGPGMPATPNAWQ
NPQNAPLYPGTDYAASAAMQAQPSAGQVPAWDPSLQARPSYGSVPGTVPGQAYQASAVPT
YMNAAPPAGSSPLSQPGATSMRMPPPGGAPLLGQPPYYGQ
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgtcaagccaaactcagttccgttatacccagacaccatcgaaggtcctgcat
ctccgtaatctaccatgggagtgtacggaagaggaactcgttgagctttgtaaacccttt
gggaagatcgttaacactaagtgcaatgtcggcgccaatcggaaccaagcttttgttgaa
tttgtagacttaaatcaggctatttcgatggtttcatactatgcttcgtcatcggagccg
gcacaggttcgtggaaaaacagtatatattcaatattcaaacagacatgaaattgtcaac
aacaaaagtcctggagataccccaggaaatgttttgctggttaccattgagggtgtggaa
gctaatgatgtgaccattgagacaattcacttggtattttctgcatttggttttgtgcat
aaaattgctacttttgaaaaggctgcgggattccaggcattaatccaattcactgatgct
gaaactgcatcttcagcaaggaatgccttggacggtagaagtattcccaggtacttgctt
ccaggccatgttacttcttgtcacctgcgaatttcgtattctgcacacactgatctgaat
atcaagtttcagtctcatcggagcagggattataccaatccataccttcctgtcaatcca
actgcgatggagggactcatgcagcctgtagttggtcctgatggaaaaaagcaagaacct
cagagtaatgtgctacttgcttcaattgaaaatatgcagtatgctgtgacagttgatgtt
cttcactcggtattctctgcatttggcactgtccaaaagattgctatatttgagaagaat
ggcggaacacaggcactaattcaatatccggatgtcacgactgcagctgtcgccaaagaa
tccttagagggacactgcatatatgagggtggctattgtaagcttcatctatcatactct
cgtcatactgatctcaatgtaaaggcttacagtgataaaagtagagattacacaatctca
gacctaagtttgcttgcgacacaaggtccaggtatgcctgccactccaaatgcttggcag
aatcctcagaatgctccattataccctgggactgactatgcagcttcagcggcaatgcaa
gctcaaccctctgccggacaagttcctgcttgggatccaagtttacaggctagaccatca
tacggatcagtgcctgggactgttcctggtcaagcatatcaagcgtctgcagtccctaca
tacatgaatgctgcgccacctgctggttcatcacccctttcccaacctggtgcgacttcc
atgagaatgccacctccaggtggtgcaccactgctaggtcagcctccctattatggtcaa
tga
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