Gossypium raimondii: 105798261
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Entry
105798261 CDS
T04129
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gra03000
]
105798261
03036 Chromosome and associated proteins [BR:
gra03036
]
105798261
Transcription factors [BR:
gra03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
105798261
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
105798261
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
CHDNT
CDC45
Motif
Other DBs
NCBI-GeneID:
105798261
NCBI-ProteinID:
XP_012483714
UniProt:
A0A0D2Q247
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Position
9:complement(6426635..6432845)
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AA seq
639 aa
AA seq
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MTDGHLFNNISLGGRGGTNPGQLKISSGGILWKKQGGGKAVEVDKSDILGVTWMKVPRTN
QLGVRIKDGLYYKFTGFRDQDVASLTSFFQNNCGIAPEEKQLSVSGRNWGEVDLSGNMLA
FMTGTKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDENRPPAQVFREKIMSVADVGAGVEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVMQFETDYVVQSTLSIN
EDLLNTKYKDRLEPSYKGLIHEVFTTIMRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG
VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
RNEYHNLFDFISSKGLKIMNLGDVRTTDGVAEILQNDDDDAVDPHLERIKNEAGGDESDE
EDEDFVLDKDDEGSPTDDSGEDDSDASDSGDEKEKPAKRDPRKEASSSKATKKKSKDGQD
DGKKKKRRKKDPNAPKRAMSGFMFFSQVERENIKKTNPGASFAEISRILGEKWKKLSEEE
KEPYEAKAKVDKRRYDVERNAYKNPQPMNIDSGNESDSE
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgactgacggccatctcttcaacaacatctccctcggcggccgaggtggcacgaatcct
ggacagcttaaaatttcttcaggggggattttatggaagaaacaaggaggtggaaaagct
gtagaagttgataagtctgatatcttaggggttacatggatgaaggtccctaggacaaat
caacttggtgttagaatcaaagatgggttgtattacaaattcactggattccgtgaccag
gatgttgccagtttgaccagtttttttcagaataattgtggaatagccccagaagaaaag
cagctttctgtcagtggtcgtaattggggagaagttgatttaagtgggaatatgcttgcc
tttatgactggtacgaaacaagctttcgaagtgtctttagcagatgtgtcacaaacacag
cttcaaggaaaaaatgatgtcatcttggagttccatgtggatgatacaactggagctaat
gagaaagattcactgatggagataagtttccacatacctaattctaatacccaatttgtt
ggtgatgaaaaccgcccacctgctcaggtttttcgtgaaaaaatcatgtcagtggccgat
gttggtgctggagttgaggaagctgttgttactttcgagggcattgcaatcctcacacca
aggggtcggtatagtgtcgaacttcatctttcattcttgagactccaagggcaggcaaat
gatttcaaaattcagtatagcagtgttgttcgcctgtttttgcttccaaagtccaaccaa
cctcacacttttgttgttgtcacacttgacccacctatccgcaaagggcaaactttgtac
ccccatattgtcatgcagtttgaaactgattatgtcgttcaaagcaccttgtccataaat
gaggatcttttgaatacaaagtacaaggacaggttggaaccttcttacaagggactcatc
catgaagtgtttaccacaataatgcgtggtttatctggtgcaaaagttacaaagccagga
aaattccgtagctgccaagatggttatgcggtcaagtcttccctgaaagctgaagatggt
gtcctgtatccccttgaaaagagcttcttctttctacccaaaccacctacacttattctt
catgaggagattgactatgttgaatttgagaggcatgctgctggtggctcaaatatgcat
tactttgatcttctcataagattaaaaactgagcaagaacatttattccggaatattcag
agaaatgaatatcacaatttgtttgactttatcagttcgaagggtttgaagattatgaac
cttggagatgtacggaccacagatggggtggctgaaattctccaaaatgatgatgatgat
gctgttgatcctcatcttgaacgcattaagaatgaagctggtggggatgaaagtgatgag
gaggatgaggatttcgttcttgacaaggatgatgaaggatcaccaactgatgattctggg
gaagatgattcggatgctagtgacagtggagatgagaaagagaagcctgccaaaagggat
cccagaaaggaagcttcttcttctaaggcaactaagaaaaaatctaaagatggacaagat
gatgggaagaagaaaaaaaggagaaagaaggatccaaatgcaccaaagagggctatgtcg
ggtttcatgtttttctcacaagtggagagggagaacataaagaaaactaatcctggagct
tcatttgctgagatatcgagaatactcggagagaagtggaaaaagctgtcagaggaggaa
aaagaaccatatgaagcaaaggctaaagtagataaaagacgatacgatgttgaaaggaat
gcatataaaaatcctcagccgatgaacatagattcaggaaatgaatctgacagtgaataa
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