Gossypium raimondii: 105798405
Help
Entry
105798405 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105798405 isoform X2
KO
K05294
GPI inositol-deacylase [EC:3.-.-.-]
Organism
gra
Gossypium raimondii
Pathway
gra00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
gra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
105798405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105798405
Membrane trafficking [BR:
gra04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Post-GPI attachment to proteins factors (PGAP)
105798405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PGAP1
Abhydrolase_6
Palm_thioest
Abhydrolase_1
Hydrolase_4
DUF676
Motif
Other DBs
NCBI-GeneID:
105798405
NCBI-ProteinID:
XP_012483909
UniProt:
A0A0D2NLF3
LinkDB
All DBs
Position
9:10635641..10644185
Genome browser
AA seq
1099 aa
AA seq
DB search
MESERRKSNDSRMQGFSPSLRAVVLIIALLWVVVVTLYGLLKPISNGCVMTYMYPTYIPI
STAEGVLSAKYGLYLYHEGWRNIDFKEHLKNLKGVPVLFIPGNGGSYKQVRSLAAESERA
YQGGALEHSFYREAYLTSEEGGNADVNDFQLPNQYANRLDWFSVDLEGEHSAMDGRILEE
HTEYVVYAIHRILDQYKESHDAREREGAAITGSLPKSVILIGHSMGGFVARAATVHPHLR
KSTVETILTLSSPHQSPPVALQPSLGHYYESINQEWRQGYDVQTTQTGEYVSSPKLSHVV
IVSISGGYNDYQVRSKLESLDGIVPPTHGFMIGSTSMKNVWLSMEHQAICWCNQLVVQVS
HTLLSLIDSRRGQPLSDTQKRLAILSKMLRSGIQQSFKWRSQLFWSTRVPFKDVKYTAVS
QDHTFSDCPSSVHWSDDVPERDLYIQKKTVNILAMDGRRRWLDILELGSNGKSHFIFVTN
LAPCSGVRVHLWPQKGNLPSDLPAGKSVLEVTSKMVQIPAGQAPRQIEPGSQTEQASPSA
LLHLGPEEMHGFRYLTISVAPHTTISGSPPTTSMAIGQFFNPDEGEIEFSPISMLSSRHF
HEDIFFKEDHPLAFNLSFAINLGLLPVTFSLKTTSCGIKGSGLLDEGGDMDNTKLCKQRC
FPPVAFAWDPTSGLHIFPNLYSETLVVDSSPALWTSTGAEKTVVLLLLDPHCSYKASLAV
SVTKAASRYLLLYCPKMFAFNVAVLFFALMRQAHERPIPSILKAVETNLRIPFPFLPLAV
VPILFCLFFSFITSQPFPPFCSFIIVSITCYLLSNGFIILLILVSELVFYVAAYLHVSMK
RRWELRKGNFFFLFLQWFMNLSSRFFSLKVVRILRARPLFVPIFMAIILSTFVHPALGLL
ILLFSHALCCHSFLCNSLTASLRSNVRKKEVDDRSEGNCSSQQVTSQPGSPSKENRPSYS
QAQEDIFHQRHGLLVLHLVAALMFGPSLVSWLQRIGMHKSFPRFLDSLLCICMILHGIFS
SESLVNSSLPFPRILGQEMSLSFIYLIAGIYCYLSGLNMVPYKAMYAMGAVSIISFTSTV
VQVWTGAPRDRGKWKPRRQ
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcgagagaaggaaaagtaatgattcgagaatgcaagggtttagtcctagttta
agagcagtggtgcttataattgcgctgctatgggttgttgtagttactttgtatggttta
ttgaagcctatatcaaatggttgtgtcatgacatatatgtatccaacttatatccccatt
tccactgcggagggcgtcttgtccgcaaaatatggtttgtatttgtatcacgaaggttgg
agaaacattgactttaaggaacacttgaagaatctcaaaggagttccggttctctttatt
ccaggaaatggcggtagctacaaacaggttcgttccttggcagctgaatctgagagagct
tatcaaggaggtgcacttgaacattcattctatagagaagcttatctaacttctgaggag
ggagggaatgcggatgtgaatgactttcaattgccaaaccaatatgctaacaggctagat
tggttttctgtggatcttgagggggaacattctgcaatggatggtcggatacttgaagag
cacactgaatatgttgtatatgctattcacaggattttggatcaatataaagaatcgcat
gatgcccgggaaagagagggtgctgcaatcactggtagtttgccaaaaagtgttatattg
attggtcactctatgggtggtttcgttgctagagctgctacggtccacccccatctaagg
aaatcaactgttgaaactattctcactctttcaagtccccaccaatctcctcctgtggca
ttgcagccgtccctgggtcactattatgaaagcataaatcaagaatggagacagggttat
gatgttcaaaccactcaaaccggagaatatgtctcaagcccaaaactatctcatgtagtt
attgtttccatttctggtggttataatgattatcaggtacgctcaaaattggaatccctg
gatggcattgttcctcccactcacggatttatgataggcagtacaagcatgaaaaatgta
tggctgtcgatggaacatcaagctatttgttggtgcaatcaactagttgtgcaagtgtcg
catactctccttagtttgatagactccagaagaggccagccgctttctgacactcaaaaa
agacttgcaatattatcaaagatgcttcgtagtggaatacagcaaagtttcaagtggaga
tcacagttattctggtcaactcgtgtcccttttaaggatgtaaaatacactgctgtttct
caggatcataccttttctgactgtcctagcagtgttcattggagtgatgacgtccctgag
agggatttgtatattcagaaaaaaactgttaacattttggctatggatgggagaaggcgg
tggttggacatactggaactggggtcaaacggaaaaagccactttatatttgtgacaaac
cttgctccttgttctggagtccgagttcatctttggccccagaaagggaacttaccttca
gatttgcctgctggtaagagcgttctggaagtgacatcaaagatggtgcaaattcctgca
ggacaagcaccaaggcagattgagcctggcagccagactgagcaagcatctccatctgct
ctacttcatttgggccctgaggaaatgcatggtttcagatatctgactatctcagttgca
cctcatacgactatttcaggcagtccaccaaccacctccatggcaattgggcagttcttt
aatccagatgaaggagagatagaattctctcctatatcgatgctttcatcaagacatttt
catgaggatatcttttttaaggaagatcacccccttgctttcaatctgtcatttgcaatt
aatttaggcctattgcctgttactttctctttgaaaactacaagctgtggaattaaaggt
tctgggcttcttgatgaaggtggagatatggacaatactaagctctgcaaacagcgttgt
ttcccacctgtagcatttgcttgggatcctacatctggtcttcatatatttccaaacttg
tacagtgagactcttgtggttgactcctccccagcactttggacttctactggggctgag
aaaaccgttgttctcttactgcttgacccacattgttcatacaaggcaagcttagctgtt
tctgtaactaaagcagctagcagatacttgcttctatactgtccaaagatgtttgccttc
aatgttgctgttttattctttgctctgatgcgacaagcacatgaaaggccgattccttct
atactaaaagctgtggagaccaacctaagaataccattcccatttttgcctttagctgtt
gtacctattttgttttgcttgttcttttccttcataacatctcaaccatttcctccattc
tgtagcttcatcattgtgtcaataacttgttacctattatcaaatgggtttataattcta
ctgatattggtatccgagttggtcttctatgtggctgcctatttacatgtttccatgaag
aggaggtgggaactacggaaaggaaattttttctttttgtttcttcagtggtttatgaat
ctttcatccagattcttttcattgaaggtggtaaggattctaagagccagacctttattc
gttccaatattcatggcaattattttgtctacatttgtacatccggcacttggtctatta
attctactcttctctcatgctttatgttgtcatagctttctgtgcaactctttgacagcc
tcattacgcagtaatgtacggaaaaaggaagttgatgacagaagtgaaggcaattgttcg
tctcagcaagttacatcccagcctggttccccttcaaaagaaaaccgccccagttatagt
caagcacaagaagatatcttccatcaacggcatggcttactggtgctgcaccttgttgca
gcactaatgtttggtccatcgttggtatcttggttgcagagaataggaatgcacaagagc
tttcctaggttcctggattcgctcctatgcatctgcatgatcctacatggtatctttagt
tcggagtcattggtaaattcctcattgccctttccacgaatcctgggtcaggaaatgagt
ctgagtttcatctacctaatagctggaatatattgctatctctctggtctcaatatggtg
ccgtataaagcaatgtatgccatgggtgctgttagtatcatttccttcacgtcgactgtc
gtacaggtttggaccggagcacctcgtgacagaggaaaatggaaaccccgcagacaatag
DBGET
integrated database retrieval system
