Gossypium raimondii: 105798576
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Entry
105798576 CDS
T04129
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gra
Gossypium raimondii
Pathway
gra00061
Fatty acid biosynthesis
gra00071
Fatty acid degradation
gra01100
Metabolic pathways
gra01212
Fatty acid metabolism
gra04146
Peroxisome
Module
gra_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
105798576
00071 Fatty acid degradation
105798576
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
105798576
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gra01004
]
105798576
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gra04147
]
105798576
Enzymes [BR:
gra01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
105798576
Lipid biosynthesis proteins [BR:
gra01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
105798576
Exosome [BR:
gra04147
]
Exosomal proteins
Exosomal proteins of breast milk
105798576
Exosomal proteins of breast cancer cells
105798576
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
105798576
NCBI-ProteinID:
XP_012484149
UniProt:
A0A0D2SSD0
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Position
9:25933319..25944519
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AA seq
719 aa
AA seq
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MSSLKSKRAIPENGNQKGKEFTPMDSTTAQRRLNTIHAHLVSAVESAFSHSHLRSSPTAA
EFLSEQNYSVVLPEKLQTGKWNVYRSARSPLKLVSRFPDHPDIGTLHDNFLLAVDFFGDN
NYLGTRIRVDGTVGEYKWMTYREAATARTAIGCGLIHHGILKGSCIGLYFINRPEWIIAD
HACSAYSLISVPLYDTLGPDAVKYIINHAELKAVFCVPQTLNPLLSILSEIPSVRLIVVV
GGMENEVPSLPSSTGIQIVTYSRLLNQGRSYLQPFCQPKPDDIATICYTSGTTGTPKGVV
LTHGNLIANAAGFSLAVKFNPTDVYISYLPLAHIFERFNQINLAHYGVAVGFYQGDNMRL
MDDLASLRPTLFCSVPRLYNRIYAGILNAVKESGTLKERLFNAAYNSKKQAIMNGKSPSP
IWDRLVFNKIKARLGGRVRFMASGASPLSPDVMDFLKICFGGHIIEGYGMTETSCVISCM
DEGDILSGHVGSPNPACEIKLVDVPEMNYTSDDQPYPRGEICVRGPIVFQGYYKDEMQTR
EVLDEDGWLHTGDIGLWHTGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFIAQCF
IYGDSLNSSLVAIVSVDQDALKAWASSQGIKYKDLEQLCNDPRARAAVQAEMDAVGRDAQ
LRGFEFAKSVTLVLEPFTMENGLLTPTFKIKRAQAKAYFAKAISNMYVELTTSDSSHVK
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcattaaaatccaaacgcgccataccagaaaacgggaaccaaaaagggaaggaa
ttcaccccaatggattccaccacagctcaacgtcgacttaacaccattcatgcccacctt
gtttcagccgttgaatccgccttttctcattcccacctccgctcttccccaaccgctgct
gagttcctctctgaacagaattacagtgttgtgctgccagagaaattgcagacaggaaaa
tggaatgtatacagatctgctcgctctccgttgaagctagtatcgcgatttcccgatcat
cctgatattggtacattgcacgacaattttttactcgccgttgatttcttcggagataac
aattatctcggtaccagaattcgagtcgatggaacggttggagagtataagtggatgaca
taccgagaagctgcaacagctcgaacagccattggttgcggcctaatacatcatggaata
ctaaagggctcttgtattggattatatttcatcaatagaccagaatggatcattgctgat
catgcttgctctgcgtattcccttatatcagttcctttatatgacactctaggtccagat
gctgtcaagtacatcataaatcacgcggaactaaaagccgtattttgcgtgcctcagact
ttgaatcctttgctgagcattttgtccgagattccatctgttcgtttgattgtggtggtt
ggaggaatggaaaatgaagtgccttcattgccatcatcaactggcattcagattgtgaca
tattcaagattattaaatcagggccgtagttaccttcagcctttttgccaaccaaaacca
gacgacattgctaccatttgctacaccagtggtacaacaggaacgccaaagggagttgtg
ttgacacatggaaacttgattgcaaatgctgccggcttctccttagctgtaaaatttaac
cccacagacgtttacatatcgtatcttcctttggcacacattttcgaacgatttaatcag
atcaatttagctcattatggagttgcagttggattctaccagggggataacatgagattg
atggatgatctggcttctctacgacctaccttattctgcagcgtccctaggctgtataac
agaatttatgcaggtattctgaacgctgtgaaggaatcgggtaccctgaaggagaggctt
tttaatgctgcctacaactctaagaagcaagcaataatgaatggaaagagtccttctccc
atatgggacagattggtattcaacaaaataaaagctagacttggaggacgtgttcgtttt
atggcttccggtgcttcacccttgtctcctgatgtcatggacttcttgaagatatgcttt
ggtggtcatataattgaaggttatggaatgaccgagacatcatgtgtcataagttgcatg
gatgagggtgatattctttctggccatgttggctctcctaatccagcttgtgaaataaag
cttgtcgacgtcccagaaatgaactacacatcagatgaccagccttatcctcgtggagaa
atctgtgttaggggtccaattgttttccaaggatattacaaagatgaaatgcaaacgaga
gaagtacttgatgaagatggatggcttcataccggagatatagggctatggcatactggt
ggccgtctaaagattattgataggaagaagaacatttttaagctggctcagggagagtac
atagctccggaaaagattgaaaatgtatatgctaaatgcaaatttatagcccaatgtttt
atatatggagacagccttaattcttcattagtagcaattgtgtcggtggaccaagatgct
cttaaagcatgggcttcatctcaaggcattaagtacaaagatttagaacagttgtgcaat
gacccaagggcaagagctgccgtacaggctgagatggatgccgttggaagagatgctcag
ttgagaggcttcgaatttgcaaaatccgtgacgttggtgctcgaaccctttaccatggaa
aatggtctccttactcctacatttaagattaagagagcccaagcaaaggcgtattttgcc
aaagcaatttcaaatatgtatgtagagcttactacatctgattcctctcatgttaaataa
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