Gossypium raimondii: 105798577
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Entry
105798577 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105798577 isoform X1
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105798577
03029 Mitochondrial biogenesis [BR:
gra03029
]
105798577
Membrane trafficking [BR:
gra04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
105798577
Mitochondrial biogenesis [BR:
gra03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
105798577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
Beta-prop_EML
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Rieske_3
Motif
Other DBs
NCBI-GeneID:
105798577
NCBI-ProteinID:
XP_012484151
UniProt:
A0A0D2PTD4
LinkDB
All DBs
Position
7:25954754..25962303
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AA seq
796 aa
AA seq
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MTGHPWPHDRASFRYQPSSNRRRSSKNILHLLGKREVSPRTKYVPKKLWGEAPKRNVYSS
PWTEPIRDARRGILSWAEEESLQHLSGKYCPLVPPPRSTIAAAFSSDGRTLASTHGDHTV
KIIDYQKGKCLKVLSGHRRTPWVVRFHPVHPEILASGSLDHEVRLWDAKTAECLGSRDFY
RPIASLAFHAEGELLAVACGHKLYIWDYNKNGEGSSPAIILKTRRSLRAVHFHPHAAPFL
LTAEVNDLDSSDSSMTQATSQGYFHHPPPAVFVTCGQSSDHVGLAANPSLMSLPCMIVPS
FSIDDSRMDLQYISRLVGSSGTQAGHSPSMQFQTDTTMGEQYNSTASPMEAVPPIPSHLY
SGSENLVNTSVAFRMETGAAEPSFDAMDTDEIQPIRESEEPNSTNRSSYSSAQRAVPRHV
SDRQDATEFRPLLQFVPLGAICWELPFLQGWVMGQQTTFPSMRPHSGTGHENLTQYTASS
SILQPLVGNVEAAACSLGISNSISQSGVFGRIGLQNISQSRLVSETGEVPVPSNSLHDGT
DAERIISRLQSELATSMAVAAAAELPCTVKLKVWSYDIKNPCALLNVGKCCLTIPHAVLC
SEMGAHFSPCGKFLAACVACVLPHSEADPRLQALVHQDGGAGTSPTRHPISAHQVVYELR
IYSLEKATFGSVLVSRAIRAAHSLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGKTTSP
IYTVLEVYRVSDMELVRVLPSAEDEVNVACFHPFPGGGLAYGTKEGRLRVLQYDGARDTN
HNTSNYFSVENTAGVE
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgaccggacatccttggccgcacgatcgagcttccttccgatatcaaccctccagcaat
cgtcgtcgcagcagtaaaaatatattacatctgttagggaagagagaagtctctcctaga
acaaaatatgtaccaaagaagctgtggggagaagcacctaaacgaaatgtctattcttca
ccttggactgaacccattagagatgccagacgtggtattctgtcatgggctgaggaagag
tctttgcagcatttatcaggcaaatattgtcctctggtgcctcctccaaggtcaacaatt
gcagcagcttttagttctgatggaagaacacttgcttctacccatggtgatcacactgtg
aagattattgattatcaaaagggaaagtgcttaaaggtcttgagtggtcatcggagaaca
ccttgggtggttagatttcacccagtgcatccagaaattcttgcaagtgggagcttggat
catgaagttcgtttgtgggatgcaaagactgcagagtgtttaggatctcgtgatttctat
cgtccaattgcttcccttgcttttcatgcagaaggagaacttcttgcagttgcatgtggt
cacaagttgtacatatgggactacaataagaatggagagggttcctcaccagccattata
ttgaagacacgacgatctctacgagctgtacactttcacccacatgctgctccttttctc
ttgactgctgaggtgaatgatcttgactcttcagattcttcaatgacacaagcaacatcg
cagggctacttccatcatcctcctcctgcagtttttgtgacatgtggtcaatctagtgat
catgtcggtttggctgctaatccctccctgatgtcattgccttgcatgattgtgccttca
ttttccatagatgattcgagaatggatttgcagtacattagtaggcttgttgggtcatct
ggtacgcaggctgggcattctccttcaatgcaatttcaaacagatacaacaatgggagaa
cagtataatagcacagcatctcccatggaggcagttcctccaattccttctcatttgtat
tctggttcagagaatcttgtaaatacctcagttgcttttaggatggaaactggtgcagcc
gaaccctctttcgatgctatggatactgatgaaattcagcctataagggaaagtgaggaa
cctaactctactaaccgcagtagttatagtagtgcacagagggcagtgcctagacatgtt
tctgaccgacaagatgccacggaatttcggccacttctgcaatttgtacccttgggagct
atatgttgggagcttccatttctgcaagggtgggtaatgggtcaacaaacaacttttccc
tctatgcgtcctcatagtggcactggtcatgaaaatttaactcaatacacagcgtcttcc
tcgatattgcagcctttggtcggtaatgtggaggctgctgcatgttctttgggaatatcc
aacagcattagccaatccggggtttttggaagaattggattgcaaaatatttcacagtct
cgcttagtttctgaaactggtgaagttcctgtgcctagcaattctctgcatgatggcact
gatgctgaacgaattataagtcgactccaatctgaacttgccacatcaatggctgtagct
gcagctgccgagttgccttgcacggtgaagcttaaagtgtggtcatatgatataaaaaat
ccttgtgcactactaaatgttggcaaatgctgcttaaccataccacatgctgtcctttgt
agtgaaatgggtgcacatttttcaccttgtgggaaatttttagctgcttgtgttgcttgt
gtgcttcctcattcggaagctgatcctcgattacaggcattggtccatcaagatggtggg
gctggaacatccccaactcgacatccaatctcagcacaccaagtcgtatatgagcttcgg
atatattctcttgagaaggcaacctttggttcagtgcttgtttcgcgagcaattagagct
gcacattctttgacatcaattcagttctcaccgacttctgagcacatattacttgcctat
ggtcggcgtcatggttctcttcttaaaagcatcgtaattgacgggaaaacaacatctcct
atatacacagtactagaggtatatagagtttcggatatggaacttgtgagggtacttcct
agcgcagaggatgaggtaaatgttgcatgctttcatcctttccctggaggaggtcttgcg
tatggaaccaaggaagggagactgagagtgcttcagtacgatggtgctcgagacaccaat
cacaacacatcaaattacttctctgtagaaaacacggccggagtagaatag
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