KEGG   Gossypium raimondii: 105798639
Entry
105798639         CDS       T04129                                 
Name
(RefSeq) exonuclease 1 isoform X1
  KO
K10746  exonuclease 1 [EC:3.1.-.-]
Organism
gra  Gossypium raimondii
Pathway
gra03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    105798639
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gra03032]
    105798639
   03400 DNA repair and recombination proteins [BR:gra03400]
    105798639
DNA replication proteins [BR:gra03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    105798639
DNA repair and recombination proteins [BR:gra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     105798639
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc 5_3_exonuc_N XPG_I_2 TPR_2
Other DBs
NCBI-GeneID: 105798639
NCBI-ProteinID: XP_012484220
UniProt: A0A0D2RXQ4
LinkDB
Position
9:23670918..23676068
AA seq 562 aa
MGIKDLLRFMKPFIEPVHIKKYAGKRVGIDAYSWLHKGAYSCSMEICLDSNSEKKLRYIA
YFMHRVNFLRHHKITPVVVFDGANIPCKAATENERYRRRKENRELAIAKLKEGHIQGATE
LFQRAVSITPAMASQLIQILKSENVEFVVAPYEADAQLAYLATLEAEKGGVVSVITEDSD
LIAYGCPTVTFKMDRYGNGEELVLSKVFDSVSSKPSFRSFDKELFTGMCVLAGCDFLPSV
PGIGIVKAHSLVSKYRNLDRVLSVLKIEKGSQMPEDYTKSFKEALAVFQHARIYDAEIRE
LKHIKPLTEQLLQYLDEGLDFLGPKIPPSVAVAIAEGKLDPTTMEAFDCNNIEPAKFQNS
VETTDNSRQASCFMVFSSHKTREKRKTGTMSMKQVVVSTESKYFKDAGLEKLAFPVKTRP
KNENMVLEETPLKVPNNNPFKKRKFDEMTELVSSKGEDEKLEMSCVFPDDSQLTFPDNSS
LSDTGKLEISNQIDSIAEQISMMSEVECCETLCINMGSQESVSSKPNRVYSERKRGQNVK
LKSSNCNRSGTKNTILNFFARV
NT seq 1689 nt   +upstreamnt  +downstreamnt
atgggaatcaaagatctgcttagattcatgaaacctttcattgaaccggttcacatcaag
aaatacgctggcaagcgggtgggtattgatgcttattcatggttacataaaggagcgtat
tcatgtagcatggagatttgtttggattcaaacagtgaaaagaaattgcgatacatagct
tactttatgcacagagtcaattttcttcgtcatcataagataacccccgttgttgttttt
gatggtgcaaatattccctgcaaggctgccactgaaaatgaaagatacaggaggaggaaa
gagaaccgggaactggcaattgctaagcttaaagaggggcatattcaaggtgcaactgag
cttttccagagagcagtgagcatcactccagccatggcaagtcaattgattcagatcctg
aaatcagagaatgttgaatttgtggtagctccatatgaggctgatgcacagctagcatat
ttggccactcttgaggctgaaaaaggtggagttgtgtcagtgattacagaagacagtgat
ctaatagcatatggttgtccaactgtcacatttaaaatggaccgttatggcaatggagaa
gaactggttctgtcaaaagtttttgattctgtatccagtaaaccttccttcagaagtttt
gataaagaattgtttacaggtatgtgtgtcctagctggatgtgattttcttccatctgtt
cctggaattggtattgtaaaggcacattccttagtttccaagtatcggaacttagaccgt
gttttatcagttttgaagattgagaagggcagtcaaatgccagaagattacaccaaatcg
ttcaaagaagcacttgcagtttttcagcatgccagaatatatgatgctgaaatcagggag
ctgaaacatattaaacctcttacagaacaacttctgcaatatctagatgaagggcttgat
ttcctgggaccaaaaatccctccatcagtggcagttgcgattgctgaaggaaagttagac
cccactacaatggaggcctttgactgtaataatatagagcctgctaagtttcaaaattct
gttgaaactactgataattccagacaagcaagctgcttcatggtattttcttcacataaa
accagagaaaaaaggaagacaggtacaatgagcatgaagcaagttgtagtttcaactgaa
agcaagtattttaaagatgctggactggagaaattagcatttccagtaaaaacccgtccg
aaaaatgagaatatggttttagaggaaactccattgaaggttccaaataataaccctttc
aagaaaagaaaatttgatgaaatgactgaactagtttcatcaaaaggcgaagatgagaag
ttggaaatgtcatgtgtttttcctgatgatagtcaattgacatttcctgacaatagtagt
ttaagtgataccgggaaacttgaaatctctaatcagatagatagcattgctgaacaaatt
tcaatgatgagtgaggtagaatgttgtgagaccttgtgcatcaatatgggatcccaagaa
agtgtcagctctaaaccaaacagagtgtacagtgaaagaaaaagaggtcaaaatgtcaag
ctgaagagcagtaattgcaacaggtcagggaccaagaacactattttgaacttctttgct
cgtgtgtga

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