Gossypium raimondii: 105798699
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Entry
105798699 CDS
T04129
Name
(RefSeq) LOW QUALITY PROTEIN: CLIP-associated protein
KO
K16578
CLIP-associating protein 1/2
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gra03036
]
105798699
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gra04812
]
105798699
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
105798699
Cytoskeleton proteins [BR:
gra04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
105798699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
HEAT_EF3_N
Vac14_Fab1_bd
HEAT_EZ
TOR1L1_N
HEAT_2
Cnd1
Adaptin_N
HEAT_Maestro
INTS1_R4
PDS5
UTP20
TPR_TTI1_C
MMS19_C
Tti2
Sec7-like_HUS
V-ATPase_H_N
mTOR_dom
SEN1_N
Motif
Other DBs
NCBI-GeneID:
105798699
NCBI-ProteinID:
XP_012484319
UniProt:
A0A0D2PTD8
LinkDB
All DBs
Position
7:complement(25541107..25557550)
Genome browser
AA seq
1440 aa
AA seq
DB search
MEEALELARAKDTKERMAAVERLYHLLEGSRKSLTYSEVTSLVDCCMDLLNDNNFRVSQG
ALQALASAAVLSGDHLKLHFNALVPAVVERLGDAKQPVRDAARRLLLTLMEVSSPTIIVE
RAGSYGWTHRSWRVREEFAQTVTSAISLFASTELPLQRAILPPILQMLHDSNPGVREAAI
LCIEEMYMQAGTQFRDELHRHQLPASMVRDINARLEKTEMLVRPSNGTLGGLAAGDRKPV
IYNVKKSSPRAKSSSRETYLLGGEIDVTEKSTDPIKVYSDKELIREFEKIASTLMPEKDW
SIRIAAMQRVEGLVSGGAADYPCFRGLLKQLVGPLSTQLSDRRSSIVKQACHLLCFLSKE
FFGEFESCAEMFIPVLFKLVVITVLVIAESADNCIKMMLHNCKVARVLPRIADCAKNDRN
AVLRARCCEYALLILEHWPDAPEIQRSADLYEDLIRCCVADAISEVRSTARMCYRMFTKT
WPDRSRRLFSSFDPAIQRIINEEDGGMHRRHASPSLRDRNVKISFTSQTSATLNVPGCGT
SAIVAMDRTSSLSSGTSLSSGLNFSQSKPVGKGAERTLESVLHASKQKVSAIESMLRGLD
ISEKQRSTSLALGVDPPSFRDPPFPAAVSASNSLTSSLGLESITSTVGKSGNHNGDLILS
DIITQTSKDSGKLSYRSNVATESFPVLSSYSPRRAAVRPDRGSIEDNTDIREASRFIKPH
IDRQYFEMPYRDVNSRHSQNNNIPNFQRPLSRKHVSGRISAERRKIFDDNQPSLGEISNY
VDGPASLTEALSEGLSPSSNWCARVAAFMYLQSLLQQGPKGVLEVNQNFMKVMKLFFQHL
DDPHHKVAQAALSTLADIIPSCRKPFESYMERILPHVFSRLIDPKESVRQPCSTTLGIVS
KTYSIDSLLPALLRSLDEQRSPKAKLAVIEFSISSFNKHATNSEGSSNIGILMLWLAKLK
PLVHDKNTKLKDAAISCIISVYSHFDAIAVLNFILSLSVEEQNSLRRALKQYTPRIEVDL
ISYLQNKKERQRSKSSYDPYDAVGTWSEEGYVGVSKKSLLLGRYSSGSVDSEGGRKGSTQ
DSTLITGPIGQETSDETQVNLFQNFGISSNADVLPSKTKELSYMVNSNDQNLGSQMGQVE
NLESSVNMEGLSTPHLETNGPSRFDSLVDVKGVACDHDISSELDLNHLKPAPVKIGSMPD
TGPSIPKILHLFCNGIDESSTASKRGALQQLIEISVANDISIWTKYFNQILTTLLEVLDD
SDSSIRELALSLIVQMLKNQKDAMEDSVEIVIEKLLHVTKDIVPKVSNEAENCLNTVMSQ
YDPFRCLSVIVPLLVTEDEKTLVICINCLTKLVGQLSQEDLMSLLPSFLPAIFEAFGNQS
ADVRKTVVFCLVDIYIMLGKAFLPHLEGLNSTQLRLVTIYANRISQARXGTSIDAMLPTN
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggcactggagctggcacgcgccaaagacaccaaggagcgaatggcggctgtg
gaacgtctctaccacctcctcgaaggttccagaaagagtctgacttattcggaggttact
tcgctcgtggattgctgcatggatctcctcaacgacaacaacttcagagtctcccagggc
gctctccaggctcttgcttctgccgccgtcctctctggtgatcacttgaagttgcacttc
aacgcgcttgttcccgcggttgttgaacggttaggtgacgctaagcaacccgtcagagac
gctgcgagacgcctacttctcactctcatggaggtttcttctccaacaattattgttgaa
agggcgggctcttacggctggacgcatagaagttggagagttagggaggaatttgcccag
acagtcacatccgcaatcagtctttttgcatctactgagcttccacttcaacgggctatt
ctcccccccattttgcagatgttgcatgactcaaatcccggtgttcgtgaagctgctata
ttgtgcattgaggaaatgtatatgcaggctggaacccaatttcgtgatgaacttcatcgc
catcagcttcctgcatctatggtgagagatattaatgccagactagagaaaactgagatg
ctagttcgaccttcaaatggaacgttgggtggtcttgctgctggagatagaaagcctgtc
atctataacgtcaagaaaagcagtccacgagccaagagttcttcaagggagacatatctt
ttgggaggtgaaattgatgtcacagaaaaatccacagatcctattaaagtttactcagat
aaggagttgataagggaatttgagaaaattgcttctactcttatgccagaaaaagattgg
tccattcgcattgctgcaatgcagagagttgaaggccttgtttctggaggtgctgctgat
tatccatgtttccggggacttttgaagcagcttgttggcccactaagtacacagttatca
gatagaaggtcaagcattgtgaagcaggcttgccatttgttgtgcttcttatcaaaggag
ttctttggagaattcgagtcatgtgctgagatgttcatcccagtccttttcaagttggtt
gtgattactgtgcttgtaattgcagagtctgcagataattgcataaaaatgatgttgcat
aactgcaaagttgcccgcgtgcttccccgcatagctgattgtgcaaagaatgaccgtaat
gctgtactccgtgccaggtgctgtgaatatgcactgttgatacttgaacattggccagat
gcaccagaaatacagcgatcagctgatttatatgaggatttgattaggtgttgtgttgct
gatgccattagtgaggtacgatcaactgctagaatgtgctacagaatgttcaccaaaact
tggccagatcgttctcgtcgcttgttctcctcctttgatcctgccattcaaaggataatt
aatgaagaagatggagggatgcataggcggcatgcatctccatctctccgtgacagaaat
gtaaagatttcatttacctcacaaacttctgctactttaaatgtacctggatgtggaacg
tctgctatagttgcaatggacagaacttcaagcttgtcctcagggacatctctctcttct
gggttgaatttctcccaatcaaagcccgtaggtaaaggtgctgagcgtactctggagagt
gtattgcatgcaagcaaacagaaagttagtgctattgaaagtatgcttagaggtctggac
atatctgaaaaacagaggtcgacaagtttggctctaggagttgaccctccatcatttcgt
gatccaccattccctgctgctgtttcagcttctaatagtctcacaagctctttaggacta
gaatcaatcacctctactgttggtaaaagtggtaaccacaatggtgatctgattctgtct
gatatcatcactcaaacttccaaagattcaggcaagttgtcatatagaagtaatgtggca
actgagtcttttccagttttatcatcatactctcccaggagggcagctgtaaggccagac
cgaggttctattgaagataacaccgatatcagagaggccagtcggtttataaaaccacat
attgacaggcaatattttgaaatgccctatagagatgtaaactccaggcattcacagaac
aataatattccaaacttccagaggccactttcaagaaagcatgtatctgggcggatctct
gctgaaaggagaaagatttttgatgataaccaaccgtcacttggtgagatttcaaattat
gttgatggtccagcttctctcaccgaagccctaagtgaggggcttagtcctagttctaat
tggtgtgccagagttgctgcttttatgtatctccagtctttgttgcagcagggtccaaaa
ggtgttctggaagtgaatcaaaatttcatgaaggtaatgaaattgtttttccagcacttg
gatgaccctcaccataaagttgcacaggctgctctttcaacacttgcagatattattcca
tcatgccgaaagccctttgagagttacatggaaaggatcttaccccatgttttctcgcgg
ttaattgatccaaaggagtcggttaggcaaccttgctccacaacattgggaattgttagc
aaaacttatagcatagattctcttttacctgctttgctacgttctcttgatgaacagcga
tcaccaaaggcaaagctagctgttattgagttttccattagttccttcaacaagcatgct
acgaattctgaaggttctagtaatattggcatcctgatgttatggcttgctaaattgaaa
cctttggtccatgataaaaataccaagcttaaggatgcggctatttcttgcattatatct
gtatattcacattttgatgcgattgctgttctaaattttattcttagtttatcagttgaa
gagcaaaattccttgagacgggcccttaaacagtacacacctcgtattgaggtggacctg
ataagctatttgcagaacaagaaagagagacagcggtctaagtcatcttatgatccatat
gatgctgttggaacatggtctgaagaaggatatgttggtgtgtccaagaagagtctttta
cttggaaggtattcttctggttccgttgatagtgaaggtggtaggaagggttccactcaa
gattcaaccctgatcactggccctattggccaggaaacatctgatgaaactcaggttaac
ttatttcagaacttcgggatcagttcaaatgcagatgttcttccttccaaaaccaaagaa
ttgtcttatatggttaattctaatgatcagaacttgggatctcaaatgggacaagtagag
aacttggaaagtagtgttaacatggaaggtctatctactccacatctggaaactaacggt
ccaagtagatttgattctttagtggacgttaaaggggttgcctgtgatcatgacatttca
tcagagctggatcttaatcatctcaaacctgcacctgtaaagattggctctatgccagat
acaggacctagcattcctaaaattcttcacctgttctgcaatgggattgatgagagctct
acagccagtaagcgtggtgcacttcagcaattaattgaaatttctgtggctaatgatatc
tctatttggaccaagtacttcaatcagattttgacaactctacttgaagttttagatgat
tccgattcctctatccgagaacttgccctgtcgttgatagttcaaatgcttaaaaaccag
aaagatgctatggaagattctgttgaaatagtaattgagaagctgcttcatgtaacaaag
gatattgttcccaaagtttcaaatgaagctgagaactgcttgaacactgttatgtctcag
tatgatccattcagatgtttaagtgttattgtacctttattagttactgaagatgagaag
actctagttatttgcataaactgtttaacaaagcttgtgggccagctatcacaggaggat
ctaatgtctctattgccttcatttttgcctgctatttttgaagcttttggaaaccagagt
gcagatgtccgtaagactgtggtattctgtttggtcgatatttatataatgcttgggaaa
gcatttttgccacacttggaagggcttaacagcacacagctgcgactggttacaatttat
gctaatcggatctcacaggccaganttgggacctctatagatgcaatgctaccaaccaat
tag
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