Gossypium raimondii: 105798861
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Entry
105798861 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105798861
KO
K10895
fanconi anemia group I protein
Organism
gra
Gossypium raimondii
Pathway
gra03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
105798861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gra03400
]
105798861
DNA repair and recombination proteins [BR:
gra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
105798861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCI_S4
FANCI_HD2
FANCI_S2
FANCI_HD1
FANCI_S1
CENPH
Motif
Other DBs
NCBI-GeneID:
105798861
NCBI-ProteinID:
XP_012484535
UniProt:
A0A0D2RYS1
LinkDB
All DBs
Position
9:28827516..28835301
Genome browser
AA seq
1410 aa
AA seq
DB search
MATTESAAPPLNDVDIVHLAQRKQPSNSHQQSNVSLPPFLLSPHCHKDLLSYLHSRAASP
SPSSVVCEYVISLLSLISLSPGTPTVCSLLSSLLSSYTQLFPSLPHDSNSLRTIKNFNTL
LIHVPLEDLKLVIDLVASDLSGVVSVDDAQLFDLLPQCFELIRNAEEKGGDYVNSVVDKI
LDSKWSKGFLLKMVSIAKEFSFLDKTRGNEFLEKVFVGIKTVDLMDLPSLVYQLLVLASK
GFNKREIIEGIVYFFGSELGSKMASTVRQVEGTVLLHVNFAVKQDPSLGKEVMGLVKSDL
RAFNHFTVAVLLSVSRVRRFSESSMAILKTALLTAYRDYKFTKECKWIPDDIKGEYLKSV
KVVEKSVLRAVNESNYGREHMVPSILQFGFILLESVGEVNCKELGNSNGLLGIEELGIQM
LKTLFEVHDMARNEIMEQVKFRILSLKPELSRPILRLLCYLIQCYPYPMMEHIPRLKELL
DYFTFMDGKIASYLVSALLPLIRFSRDLRDYAILVVRKAVFRREEAVRVAATNSIIELIL
AEKQPKGDGLFFLQDSSSQASCSQQADIPCSMGGDLFQELSALLQRCLYQQAKVKQVVYQ
GLVKLVLADPAIGGLVFDFLLPHFLQFFKEGPDVQLGVSSCIKSENGKVLIQEPLDCLLS
CISWILLLQTHGKTDKLLDSIGACFGFSLSQENEDGRNMSTEVFSGAFLKIRKFLRNANL
EDILGQTHDASSAAVHEEKWKCSALILSGVIEVVLNTVAMDLEKAADQKVELEKEIMQFV
DRHDSLAKEASTSRQSNAGKRPNLRATAKDATDDIDSGNPKLIQEHTFFLATSSIHQLLL
MALKLYSSESSDIKATSQNHSQSSSSKTSKSCFKIISFALNASLHHVKSSAAVGNEGPMK
KLIYGEINMLGPPLLRLTLLLKPGSNVATSHRKKESKAKKDAEERKEHLLLALFCLKEMI
TVSLCGSCLTHLLENLLSVPELENADLHDECDQASEIDDQDIKNKELFIQKYLKPLLTDL
MKLSAFRTVEILCDILLMIGHKLPCKWRNSHGAWAIRMCKTNNTTNSSIAKSMVRLATSL
SSPPTDLLVAQEMLKELLKFIGPNNSDLSQVSEYLVVNQSTTIAIASCLLQITDNVIIDV
DWSTKKLKAASQVAQKTIHHDQNGEHNLGFTFEEIVYSRIKAVVEVLSSFVLMSLKDNQA
EHFLRLTARFYKNLALISKLKIAPKGQKQLLPSLQFQKLVELTCKELTVPLYNFVAEMQQ
AQQENANSKGMINKIKRENKCIPELIFQIEDYEKHLIRLSKATKMNLLKHAKRSTCRDFK
ILDPTTAVVGQAVPNNVGNDNDNENENENENENGRCSDSEDGNNDGNGSDKELSHEVESE
SDAVEDDRASVPTVKGVKRSRIVHDSDDDS
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atggccaccacggaatcggcggcgccgccgttaaacgacgtcgatatcgtgcatttagct
caacgaaagcaaccttccaacagccatcaacaatccaacgtttcactgcctccatttctc
ctctctcctcactgtcacaaggacctcctctcttacctccattcacgcgccgcctctcct
tctccctcctccgtcgtctgcgagtacgtcatctctcttctctccctcatttcactctct
cccggaacccccactgtctgttctttgctctcttctcttctctcatcatacactcaacta
ttcccttcgcttccccacgactcgaattccctcagaacaataaaaaatttcaacaccctt
ttgatccatgttcctttagaagacctcaagttggttattgatttggttgcatcagattta
tcaggggttgtttcagtggatgacgcccaactgttcgatcttttgccgcaatgtttcgag
ttgattcgaaacgcggaggaaaaaggtggggattatgtgaattccgtcgtggataagatt
cttgattccaaatggtcgaaaggatttttgcttaaaatggtttccattgccaaagagttt
agttttcttgataaaacgagagggaacgagtttttggagaaagttttcgtggggattaaa
actgtggatttgatggacttgccttcccttgtttatcagttgttagttttggcttcgaaa
gggttcaataaaagggagattattgaagggattgtgtacttttttgggtctgaattgggt
tcaaaaatggcttccactgttaggcaagttgaagggactgttttgttgcatgttaacttt
gcagtcaagcaggatccttctttggggaaagaggttatggggttagttaaatctgatctt
cgagcttttaatcatttcacggtggctgttttattgtcagtgtcaagggtacggaggttt
agtgaaagctcaatggctattttgaaaacagctttgcttaccgcataccgtgactataaa
ttcaccaaagaatgtaaatggataccggatgatattaagggagaatatctgaagagtgtt
aaagtggtcgagaagtccgtgttaagagctgtaaatgagagcaactatgggagggagcac
atggtgcctagtattttgcaatttggttttatcttgctagagtcagttggggaggtaaac
tgcaaagagctcggcaattctaatggtctccttggcattgaagagcttggtattcagatg
ctgaaaactctatttgaggttcatgatatggcaagaaacgagattatggagcaagtcaag
tttcgcattctctctttgaagccagagctgagtaggccaatattaaggctgctctgttat
ctcattcagtgttatccttaccctatgatggaacatattccccggcttaaggaattgctg
gattacttcactttcatggatggaaaaattgcctcttatcttgtcagtgcccttttgcct
ctcatcagattcagccgtgatcttcgggattatgctattttggttgtgcgcaaggctgtg
tttagaagagaagaagcagttcgtgttgcagcaacaaattccattatcgagcttatacta
gcggagaagcaacctaagggggatggcttgttttttctccaagactcgtctagccaagca
agctgcagtcagcaagctgacataccttgcagcatggggggagatctctttcaggagttg
agtgctttgctgcagagatgtctttatcagcaggcaaaggtgaagcaagttgtgtatcaa
ggactggtgaagctcgttctagcagatccggcaattggagggcttgtctttgattttctc
ttacctcattttctccagtttttcaaagagggtccggatgtccagcttggagttagctct
tgcattaaatcagaaaatggcaaagtacttattcaggagcccctggattgccttctttct
tgtatctcctggattttacttcttcagactcatggcaaaaccgataaacttttggattct
attggggcatgtttcggtttctccctctcgcaagagaatgaggatggcaggaacatgtct
accgaggtgttttccggtgcttttttgaagatccggaagtttctaagaaatgcaaatttg
gaagacattcttggtcaaactcatgacgcaagctctgcagctgttcatgaagagaaatgg
aaatgttctgcattgattttgtctggagttattgaagtggtattgaataccgttgcaatg
gatttggagaaagcagcagatcaaaaggttgaacttgaaaaggagattatgcagtttgtt
gaccgccatgattcattggcaaaggaggcaagtacttcaagacaaagcaatgctggcaaa
agaccaaatttacgagctactgctaaagatgcaacagatgacattgactcaggcaacccc
aaattgattcaagaacatacatttttcttggcaacttcaagcatccatcagttattgcta
atggcactgaagttatacagtagtgaaagctctgacataaaagcaacttcacagaatcat
agccagtcatcctcaagcaagacatcaaagagttgttttaagatcatttcatttgctttg
aatgcatcccttcatcatgtaaaatcttcagccgctgtgggaaatgaaggtccaatgaag
aagttgatctatggggaaatcaatatgctggggcctccattgctgagattaactcttctg
ctcaaacctggttcaaatgttgcaactagtcataggaaaaaagaaagcaaagcaaaaaag
gatgcagaggaaagaaaggaacatctccttctagcattattttgcttgaaagaaatgata
acagtcagtctatgtggttcttgtttgactcacttgcttgagaatctcttgtcagttcct
gaacttgagaatgctgatttgcatgatgaatgtgatcaagcctctgaaattgatgaccaa
gatataaaaaacaaagagctattcattcagaaatatttgaagccgctgctcactgatctt
atgaaactatcagcttttcggacggttgagattctttgtgatatcctgttgatgattggt
cacaaattgccctgcaaatggaggaactctcatggagcttgggctattcgtatgtgcaaa
accaacaacacaacaaattccagtattgcaaaaagcatggttagactagccactagtttg
agctcaccaccaacagatttgcttgtggctcaagaaatgttaaaggagctcttaaagttt
ataggaccaaacaacagtgacttatcgcaagtctcggaataccttgttgtaaaccagtca
acaaccattgctatagcttcttgtcttcttcaaataacagacaatgtcattatcgacgtg
gattggtcaactaaaaagctaaaggcagcttcacaagttgctcaaaagaccattcatcat
gaccagaatggagagcataatttgggtttcacatttgaggaaattgtatattcgaggatt
aaagccgttgttgaagtattatcttcctttgttttgatgagccttaaggataatcaagct
gagcattttcttagattaaccgcaagattttacaagaatttagctctgatttcaaagctc
aagattgcccctaaaggtcagaagcagcttttaccaagccttcaattccagaagcttgtc
gaattaacttgcaaggagctcaccgttccgctttataactttgtggcagagatgcaacaa
gctcaacaagaaaacgctaacagcaaaggaatgataaacaagatcaaaagggagaataaa
tgcatcccagagctgatattccagattgaagattatgaaaaacatctgattcgactcagc
aaagcaaccaagatgaacttattgaagcacgctaaacgcagcacttgtcgagacttcaaa
atcttggacccaacaacagctgttgtcggacaagctgttcccaacaatgttggaaatgat
aatgacaatgaaaatgaaaatgaaaatgaaaatgaaaatggaaggtgcagtgactctgaa
gatggaaacaatgatggcaatggatcagataaagagttgtcacatgaagtggagtctgaa
tctgatgccgtcgaagatgatagagctagtgttccaactgttaagggggtgaaaaggtct
agaattgttcatgattccgacgatgatagttga
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