KEGG   Gossypium raimondii: 105798961
Entry
105798961         CDS       T04129                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.1 isoform X2
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
gra  Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:gra00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:gra04812]
    105798961
Cytoskeleton proteins [BR:gra04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     105798961
SSDB
Motif
Pfam: Katanin_con80 Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WD40_WDHD1_1st EIF3I Beta-prop_WDR3_2nd Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin Beta-prop_EML ANAPC4_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd DSE1_N Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_WDR75_1st NBCH_WD40 eIF2A WD40_RFWD3 ASA1 Beta-prop_SCAP Beta-prop_ACSF4 CFAP251_N WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_NOL10_N Beta-prop_WDR41 Beta-prop_IFT140_1st Beta-prop_VPS8 Beta-prop_RIG_2nd Beta-prop_WDR75_2nd TRM82_WD
Other DBs
NCBI-GeneID: 105798961
NCBI-ProteinID: XP_012484690
LinkDB
Position
9:complement(30822947..30827827)
AA seq 676 aa
MDFHPFGEFFASGSMDRSLKIWDIRKKGCIHTYKSHTRGISSIRFSPDGRWVVSGGFDNV
VKVWDLTAGKLLNEFKFHEGHIRSINFHPLEFLLATGSADRTVKFWDLETFELIGSSKPE
AKGARSVTFHPDGKTLFCGSDDGFKVYSWEPIVCHNSADMGWSTLGDLCINKGKLLGCSY
YRNSVGVWIADIAHIVPYGQKDHMEKAGNFMRSTLGSRPLSPDYETKEIKNIYVDTAGGY
PVVMQKDVSLKSPKPVLPLDANEKNQAAENQSPGAGLNIKSNGQSGDKSVTKPSVVLQDV
DKDYTNTGEESITFSGTKSGMLLKPGHVRRLSFNNFEVEKLSAAVEPGTHSDMKTGLDSA
IDLDSETRTSPNQDILAVVPGTTRSLVERFERQEKLNSGRDLASDNGNCAGNRSSRMEST
CSSKGSITGDQISSHASSGIVTAISIKESTSASDGIILRNQFSQREATSATMTGNHIPLR
GLNSSNDENVSIIESQIPKGEPSSATDGSITDNLMQTHDIFVSTLRSRLTKLQVVRLFWV
KNDIKGAIDALRKLPDHSVQVDSISVFMQKMEILTLDLFSGLLPVLTGLLDSKIERHVIV
SLEMLLKLVAVFGPVIRLTALAPRSVSVDLHGEQRRECCNQCSMQLEKIHKLLPLLQRRG
GTIARCAHELNLVLQE
NT seq 2031 nt   +upstreamnt  +downstreamnt
atggatttccatccatttggtgagttctttgcttctggttccatggacagaagtctaaag
atatgggatattagaaaaaaggggtgcatacatacatacaagagccatactcgaggcatt
agttcgattagattctctcctgatggccgctgggtagtttcgggtggattcgataatgtt
gtaaaggtgtgggatctaactgctgggaaactcttgaatgagttcaagtttcacgaagga
catattcgttccatcaacttccatcctcttgagtttctccttgccacaggttcagcagat
agaacagtgaaattctgggatttagagacctttgaactgattggatcttccaaacctgag
gctaaaggggctcggtcagttacctttcaccctgatgggaaaacccttttctgtggatca
gatgatggttttaaggtttactcatgggagccaatagtttgtcataattctgctgatatg
ggatggtcgacactcggtgacctctgcataaataaaggcaaacttttgggttgttcgtat
tatcgaaattcggtcggagtttggatagcagatatagcgcatattgtgccatatggacaa
aaagatcatatggagaaagcagggaatttcatgaggtcaactttgggatcacggccctta
tcgcctgattacgagacaaaggaaattaagaacatctatgttgacactgctggtggttac
cccgttgttatgcaaaaagatgtctctttgaaatctccgaaaccggtactgccattggat
gccaatgaaaaaaatcaggcagcagagaaccagagtcctggagcaggacttaatattaaa
tccaatggacaatcgggtgacaagtctgttaccaagccgagtgttgttctgcaggatgtc
gataaagactatacgaataccggagaagaatctattaccttttcagggacaaaatcaggc
atgttgctcaaaccaggtcatgttagaagactatctttcaacaattttgaggttgaaaag
ctgtcagctgcagttgaacccggaactcatagtgatatgaaaactgggttagatagtgca
attgatctggattctgaaactaggacatcccctaatcaagatattttggcggttgttcca
gggacaacgcgtagtttggttgagaggtttgaacgacaagagaaattgaatagcggtcgc
gatcttgcaagtgataatgggaactgtgccggaaatcgaagttctagaatggaatcaact
tgtagctctaagggtagcattactggagatcaaatttctagccatgcatctagtggcatc
gttactgccatttctataaaggaatcaacatctgcttcggatggtatcattttgagaaat
caattttctcaaagggaagcaacctctgctacaatgactggaaatcacattcctttgaga
ggattgaattcttctaatgatgagaatgtcagtattattgaaagccaaattccaaagggt
gaaccaagctctgctaccgatggaagcataactgataacctgatgcaaacacacgacata
ttcgtaagcactctccggtcacgcttgacaaagttacaggtcgtgcggcttttttgggta
aagaatgatatcaaaggtgcaatcgatgccttacggaagctgccagaccattctgtgcaa
gtagattcgatcagtgttttcatgcaaaaaatggagattctcaccttagatctgttctct
ggcctacttccggtgcttaccggcttattagatagcaaaatcgaaaggcacgtaattgtc
tcgttggagatgctcctgaagcttgtagcagtttttggtcctgtgatacgcttaactgct
ttggctccacgcagtgtcagtgttgatcttcacggcgagcaaaggcgagaatgctgcaac
caatgttccatgcaactggagaagattcacaaacttctcccactgctccaaaggagaggt
ggtaccatagctcgatgtgcacacgaactgaatctagttcttcaagaatga

DBGET integrated database retrieval system