Gossypium raimondii: 105799003
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Entry
105799003 CDS
T04129
Name
(RefSeq) ubiquitin receptor RAD23b
KO
K10839
UV excision repair protein RAD23
Organism
gra
Gossypium raimondii
Pathway
gra03420
Nucleotide excision repair
gra04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105799003
09124 Replication and repair
03420 Nucleotide excision repair
105799003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
gra03051
]
105799003
03400 DNA repair and recombination proteins [BR:
gra03400
]
105799003
Proteasome [BR:
gra03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
105799003
DNA repair and recombination proteins [BR:
gra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
105799003
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Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
CUE
TECR_N
UBA_3
Rad60-SLD_2
Ubiquitin_2
Dsc3_N
Ubiquitin_4
Motif
Other DBs
NCBI-GeneID:
105799003
NCBI-ProteinID:
XP_012484759
UniProt:
A0A0D2SUE1
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Position
9:31535963..31541059
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AA seq
373 aa
AA seq
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MKLTVKTLKGSHFEIRVQPNDTVMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDETTLA
DNKVSEDGFLVVMLSKSKSLGSAGTSSAQPASSAPSTTAPVSNPTPAPEVPAQAPDSKSG
TSASDAATANPDTDTYSQAASNLVAGSNLEQTIQQLMDMGGGSWDKETVTRALRAAYNNP
ERAVDYLYSGIPELAEVAVPVPHFPSSQTTESGAAPVAPVSGAPNSSPLNMFPQETLSGA
AAGGLGSLDFLRNNQQFQALRSMVQSNPQILQPMLQELGKQNPQLLRLIQEHHAEFLQLI
NEPLQGSEGDIFDQAEQEMPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELA
ANYLLENSGDFED
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaccgtcaaaaccctaaagggcagccacttcgaaattagggttcagcccaac
gacactgttatggcggtgaagaaaaacatagaggatatacaagggaaagacaattaccca
tgtggacaacagcttttgattcataatgggaaggttttgaaagatgaaactacgttagct
gataacaaagtctctgaagatggttttcttgttgtcatgctcagcaagagcaaatctttg
ggttcggctgggacctcgtctgctcagcctgcttcatcagctccgtctacaactgcacct
gtttctaatcctacccctgccccagaagttcctgcacaagcaccggactcaaagagcggt
acatctgcttcagatgctgcaacagctaatccagatactgatacctatagtcaagccgct
tcgaatttagttgctggaagtaatcttgagcagactatccaacaattgatggatatgggt
ggtggcagctgggacaaagaaacagtaactcgtgcacttcgagctgcttataacaacccc
gagcgagcagtggattatctatattctggaattcctgaattggcagaagtggctgttcca
gtgcctcattttccttcaagtcaaaccactgaatctggtgctgccccagttgctcctgtt
tcaggggctcctaattcatcacctttgaacatgtttcctcaggaaacactctccggtgcc
gctgctggtggacttggatccctggatttcctccgaaacaatcaacagttccaagcattg
cgttcaatggtgcaatcaaacccacaaattttacagcccatgcttcaggagctgggaaag
caaaacccccagcttttaagactaattcaagaacatcatgccgagtttcttcagctaata
aatgaacctctccaaggttctgaaggggatatatttgatcaagctgaacaagaaatgcct
catgcaatcaatgtgaccccggcagaacaggaggctatcgaacggcttgaagcaatgggg
tttgatagagcgctcgtcatcgaagcatttttggcttgcgatcggaacgaagaattggca
gcaaactacttgctggaaaattctggggattttgaggattga
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