Gossypium raimondii: 105799041
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Entry
105799041 CDS
T04129
Name
(RefSeq) nuclear pore complex protein NUP107
KO
K14301
nuclear pore complex protein Nup107
Organism
gra
Gossypium raimondii
Pathway
gra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105799041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105799041
03036 Chromosome and associated proteins [BR:
gra03036
]
105799041
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105799041
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105799041
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup84_Nup100
AbrB_C
Motif
Other DBs
NCBI-GeneID:
105799041
NCBI-ProteinID:
XP_012484825
LinkDB
All DBs
Position
9:complement(32093808..32107268)
Genome browser
AA seq
1081 aa
AA seq
DB search
MDVDMETSPSYFDPQDHSAREKFRRYGKRYSNSSISPRQESGISKFNEAKLLYEGQIIHS
PTNAALLLENIKQEAESFDTDYFEETPSRERSASKRRPSSDGHRTAEIDNVVDSIRRLGS
HALKACKIEDDLLADNGDATFASFASLLDSAFHGVMPIPDLILQFERICRNVSESIRYES
NIRHRVVEDKLRRQKAQLLLDEAATWSLLWYLYGKVTDEPPEELILSPSTSHIEACQFVA
NDHTAQLCLRIVQWLEELASKALDLENKVRGSHVGTYLPNSGIWYHTQRFLKKGASAANT
IHHLDFDAPTREHAHQLPDDKKQDESLLEDVWTLLRAGRLEEACELCRSAGQPWRSATIC
PFGGLDLFPSIEALMKNGKNRSLQAIELESGIGHQWRLWKWASYCASERIFEQNGGKYEI
AVYAAQCSNLKRMLPICMDWETACWAMAKSWLEIQVDLELARSQPGRMEQLKSYGDGIDG
TSQPSPGPESWPLQVLNQQPRDLSALLQKLHSGEMVHEAVTRGCKEQQRQIEMNLMLGNI
PLLLELIWSWIAPSEDDQNISRPRDPQMIRFGAHVVLVLRYLLAEEIKDTFREKLMTVGD
RILHMYSLFLFSKHHEELVGIYASQLASHRCIDLFVHMMELRLNSSVHVKYKIFLSAMEY
LPFSQGDDSKGSFEEIIERLLSRSRETKAGKFDETSDVVEQHRLQSLQKALVVQWLCFTP
PSTITDVKDISAKLLMRALIHSNILFREFALISMWRVPAMPIGAHELLSFLAEPLKQLSE
TPDTFEDYVSENLKEFQDWSEYYSCDATYRNWLKIELANAEVSPDELSVEEKQRAIMAAK
ETLDLSFLLLLRERNPWLISRVEHISESMEPLFLELHATAMLRLPSGESMCPDATVCAAL
MSALYSSATEEVVSERQLAVNVAISSKDSYSIEVILRCLAVEGDGIGPHILNDGGLLSAV
MAAGFKGELARFQAGVTLEISRLDAWFSSKDGSLEGPATYIVQGLCRRCCIPEVILRCMQ
VSVSLMESGNPFESHDQLIELVSSSETGLINLFSQQQLQEFLLFEREYSICKMELQEEPS
S
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgacatggaaacgtctcccagctactttgacccccaagatcactccgctagg
gaaaagtttcgtcgttatgggaaaagatactcaaattctagcatatctccaaggcaagaa
agtggcatttcgaagttcaacgaagcaaagttgttgtacgagggacagattatccacagc
cctactaacgcagcacttcttcttgaaaacatcaaacaagaggctgagagctttgatact
gactattttgaagaaacaccttcaagggagcggtcggcttctaagaggaggccatcaagt
gatggtcatagaactgcagagattgataatgttgttgattcaatccgcagattaggaagt
catgcactaaaagcttgcaagattgaggatgatttattggcagataatggagacgcaacc
ttcgcttcgtttgcatctctacttgattctgcttttcatggggtaatgccgattcctgac
ctgattttacaatttgagagaatatgccggaatgtttcagagtcaattagatatgaatcc
aacatacgccatagggttgtagaggataaattgaggaggcagaaggctcaacttctgctt
gatgaggctgctacatggtctctcctgtggtacctttatggaaaagtgactgatgaacct
cctgaagagctcattctgtccccttcaacatcacatatagaggcttgccaatttgttgcg
aatgatcacacagcacaattatgcctccgcattgttcaatggctagaagaattggcttct
aaagcgctagatctggagaacaaggtgcgaggatctcatgttggtacctatcttcccaac
tctggaatttggtaccatactcagaggtttctcaaaaagggtgcctctgctgctaacact
attcaccacttagattttgatgctccaacacgggaacatgcccatcagctgcctgatgat
aaaaaacaagatgagtctctacttgaggatgtctggactctgttaagggctggaagactg
gaagaggcatgtgagctttgccggtctgctggacagccatggagatctgcaactatttgc
ccattcggagggttagacctatttccttctattgaagccctaatgaagaatggaaaaaat
agaagtctgcaagctattgaacttgagagtggcattggtcatcagtggcgcctttggaaa
tgggcttcctattgtgcatcagagaggatttttgagcaaaatggtgggaaatatgaaata
gctgtatatgctgcccaatgtagcaatttaaagcgcatgcttccgatctgtatggactgg
gagactgcctgttgggcaatggccaaatcatggcttgaaattcaggtagatctagaatta
gctcgttcacaacctggcaggatggaacaattaaaaagctatggagatggtattgatggt
acctcacagccttcacctggacctgaaagttggccattgcaagttttgaaccagcaacca
cgagacctttccgctctccttcagaaacttcattcaggtgaaatggtgcatgaagcagta
actcggggatgcaaggaacagcaacgtcaaatcgagatgaatctaatgttagggaatata
ccacttctccttgagcttatatggtcgtggatagcaccttcagaagatgatcaaaacatc
tccaggcctcgtgatcctcagatgattcggttcggcgcgcatgtagtgcttgttcttagg
tatctacttgctgaagaaattaaagataccttcagggaaaagcttatgactgttggtgat
cgtattcttcacatgtattcgttgtttctattttcaaagcatcatgaagaattggttggc
atttatgcttctcagcttgcaagtcatcgttgcattgacctctttgtgcacatgatggag
cttaggcttaatagcagtgtgcatgtcaaatataaaatcttcctttctgccatggagtat
ttgccattttctcaaggggatgattcgaaaggaagctttgaggaaattattgagaggctt
ttgtcacgatcacgagaaaccaaagctggaaaatttgatgaaacatctgacgttgtggag
caacataggcttcagagtcttcaaaaagctttggttgtccaatggctctgcttcacacct
ccctccacaattaccgatgttaaagatattagtgccaaacttcttatgcgagcattaata
cacagcaatatattatttagggagtttgctctgatttctatgtggagagtaccagcaatg
ccaataggtgcacatgaattgcttagttttcttgctgagcctttgaagcagctttctgaa
actcctgatacttttgaggattatgtttctgagaatctgaaagagtttcaagactggagt
gaatactactcctgtgatgcaacgtatcgcaactggctcaaaattgaattagcgaatgca
gaagtttctcccgacgaactttcagtagaggaaaaacaaagagcaataatggcagccaaa
gagacattggatttatcttttttattgctactgagggaaagaaacccatggcttatttct
cgggtggaacatattagtgaatcgatggaacctctatttcttgaattgcatgctactgca
atgctccgcctgccttctggtgaatccatgtgtccagacgctactgtttgtgctgcatta
atgagtgcactttactcttctgccactgaggaagttgtctcagaacgtcagttagcggta
aatgttgccatttcttcaaaagacagctacagcattgaggtaatattgcgctgcttggca
gtggagggtgatggaattggtccacacatcctcaatgatggtggccttctcagtgctgtt
atggcagctggcttcaaaggtgagcttgcgagatttcaagcaggagttacattggagata
tcccgattagatgcttggttttcaagcaaagatggttccttggaagggcctgcaacgtat
attgtgcagggcctctgtcgtaggtgttgtattccagaagtcattctccgatgcatgcag
gtttctgtttcactcatggagtcaggtaatccttttgaaagccatgaccagttgattgag
ctagtctcgagttcggagacagggctcatcaatctcttcagtcagcaacaattgcaggaa
tttttattgttcgagagggaatattccatatgcaaaatggagcttcaagaggagccttcc
tcatga
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