Gossypium raimondii: 105799064
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Entry
105799064 CDS
T04129
Name
(RefSeq) protein PAF1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gra03021
]
105799064
Transcription machinery [BR:
gra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
105799064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Tudor_5
Motif
Other DBs
NCBI-GeneID:
105799064
NCBI-ProteinID:
XP_012484868
UniProt:
A0A0D2RT70
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Position
9:complement(32443135..32449057)
Genome browser
AA seq
676 aa
AA seq
DB search
MASYRPFPPPQSFPPPPQNQNPLQPQQQQQQQYGQNYNHMNPNSNYGYPPRPPQQPPPPP
PPQQQYSYPPPPPPPDSSYPPPPPPPLPSMPQNTINSQPPMYYPPSQYSSQYGSQAMQPP
PPPPPPASPGSSIPPPPPPPSSPPPPPPPKENAGKTGLNERNKGGNRDYSGSGRREHGHS
NHGGGGREQKPMVPPVKKPNGPPGRVETEEERRLRKKREFEKQRQEEKQRQQMKESQKTQ
MMTSGKAHGSIVGSRMGDKRATLFLSGERIENRLKKPTTFLCKLKFRNELPDPSAQPKLM
SLKKDKDRFTKYTITSLEKMYKPKLFVEPDLGIPLDLLDLSVYNPPSIRLPLAPEDEELL
RDDAAITPVKRDGIRRKERPTDKGVSWLVKTQYISPLSMESTKQSLTEKQAKELRELKGG
RNLLVNLNNRERQIKEIEASFEASKLRPVHATNKNLEPIEVMPLLPDFERYDDQFVMVAF
DNAPTADSEIFSKLHGSVRDEHESRAIMKSYQASSSDPANPEKFLAYMVPSLGELSKDMY
DEHEDITYSWVREYHWDVRGDDANDPTTYLVSFDEGEARYVPLPTKLNLRKKRAREGRSG
DEIEHFPVPARITVRRRPTVAAIELHEPEVYSNSRGGISSSKMARLDAEDGLGRPHKLSR
HQDIDQYSGAEDDLSD
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtataggccatttcctcctccacaatcattccctccaccaccgcagaatcaa
aaccctcttcaaccccaacaacaacagcaacagcagtatggtcaaaattacaatcacatg
aatccaaattcgaattacggttaccctcctagaccaccccaacaaccaccaccacctccg
cctccacaacagcaatattcttatcctcctccaccaccgcctccagattcttcttatcca
cctcccccacctcctcctttgccttcaatgccacaaaatacgatcaattcacagccacca
atgtactatccaccttcacagtattcatcacagtatggtagtcaagcaatgcagccacct
cccccaccgcctcctccggcttctccgggttcttcaatccctccaccaccacctcctccg
agttctcctcctccaccacctcctccaaaggagaatgctgggaaaacggggttgaatgag
cgcaataaaggagggaatagggactattcaggttctggaaggcgtgaacatgggcattcc
aatcatgggggtggaggtagagagcagaagccgatggtgcctcctgtgaagaagccaaat
ggacctccaggaagggtggagaccgaggaggagagaaggttgaggaagaagagggagttt
gagaagcaaaggcaagaggagaaacaaaggcagcaaatgaaggagtcccagaagacccag
atgatgacttctgggaaagcgcatggttcaattgtagggtcacggatgggagataagaga
gctacactgtttctgagtggcgagaggattgagaacaggctaaagaagccgactacattc
ttgtgcaagttgaaattccggaatgaacttccagatcctagtgcacagcccaaactcatg
tctttgaagaaagataaagatcgatttacaaaatataccatcacttctctggagaaaatg
tacaagcctaagctttttgttgagccagatcttgggataccactggacctgcttgacctc
agtgtatacaatcctcctagtattagactgcctcttgccccagaggatgaggagctcttg
cgtgatgatgctgctataacccctgtaaaaagagatggtataagacgaaaagaaagaccc
actgacaaaggtgtttcttggctggttaaaacacagtacatatctccacttagtatggaa
tcaacaaagcagtctttgactgaaaagcaagcaaaagaactgcgagaacttaagggaggc
cgcaatcttttggtgaaccttaacaacagggaaaggcaaatcaaagaaattgaggcatca
tttgaggcatccaaattacgtcctgtccatgcaaccaataaaaacttggagcctattgaa
gttatgcccctcttacccgattttgaacggtacgatgaccagttcgttatggtggcattt
gataatgctcctacagctgactcagaaatcttcagcaagctgcatggctctgtacgtgat
gaacatgaatcgagggccattatgaaaagttatcaggcatcgagctcagatcctgctaat
cctgagaaatttttagcatacatggtgccgtctcttggtgagctatcgaaggatatgtat
gacgaacacgaagacatcacatattcttgggttcgagaataccattgggatgtacgcggc
gatgatgcaaatgacccaacgacataccttgtttcgttcgatgaaggagaagctcgctat
gtgcctcttcccacgaagcttaatttaagaaaaaagagggccagagagggaagatcaggt
gatgagattgaacattttcctgtacctgctagaattactgtgaggagaagaccaacagtt
gcagcaatagaactccatgagccagaggtttattccaactcaaggggtggtatttctagc
tcaaagatggcaaggctagatgcagaagatggccttggaagaccacacaagctttcacga
caccaagatattgaccaatatagtggagctgaagatgatttgtctgattga
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