Gossypium raimondii: 105799122
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Entry
105799122 CDS
T04129
Name
(RefSeq) protein argonaute 5
KO
K11593
eukaryotic translation initiation factor 2C
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105799122
03036 Chromosome and associated proteins [BR:
gra03036
]
105799122
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
105799122
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
105799122
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
105799122
microRNA pathway
RISC loading complex
105799122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoMid
ArgoL2
Piwi_N
Motif
Other DBs
NCBI-GeneID:
105799122
NCBI-ProteinID:
XP_052476976
LinkDB
All DBs
Position
9:33189446..33195571
Genome browser
AA seq
977 aa
AA seq
DB search
MSGRGGGERGSGRGGGRRGRGQGRGRGQPSQSSSRGGGGRARGRGSSGSTATYNPPPPQM
APAQPPPQMAVATPVPPSGAPFSHPSSSSGVGSLSREVSEKLTMEPVAVTTAPPLPPSSS
KAIRFPPRPGFGTVGTKCVVRANHFLVDVANADLHHYDVTITPEVTAKKVNRAIMKQLID
VYKESHLGRRCPAYDGRKSLYTAGPLPFESKELVIKLPEEDRSAGSSRPARKERQFKVAI
KLASKPDLHYLREFLSRKHFECPQEAIQVLDVVLRAKPSQTYTEVGRSFFHTSLGPRGEL
GNGIEYWSGYYQSLRPTQMGLSLNIDVSARSFYEPILVSEFVAKHFRRSNLSKPLSDQDR
IKVKKALKGVRVKLIYMDYAKTCKIIGVSRDPISQLTFTHDDKRTNVSVVKYFREKYNVV
LKYPSLPALQSGSEARPVYLPMELCSIVEGQRYTKKLNEQQVRSLLRATCQRPNIREGNI
TKMVQVNNFEVEELVTKEFGMHVRKELALINARVLNPPVLKYHDSGRDKIVNPSCGQWNM
INKKMVNGGKVDFWSCVNFSSEYRNMSEDFCAGLVNMCNSKGMVFRQTPSIAMRSARADR
IDQTLMDVYKESAGLNKPLKLLIIILPDQTGSYGKIKRICETELGIVSQCCKPAQASKFS
NQYFENVALKINAKVGGRNTVLNDAVLRRIPLVTDVPTIIFGADVTHPPPGEDSSSSIAA
VVASMDWPEVTKYRGIVSAQTHRVEIIEDLYKQTRDPQKGLVEGGMVRELLLAFYRSTKQ
KPSRIIFYRDGVSEGQFSQVLLYEMDAIRKACSSLQEGYMPRVTFVVVQKRHHTRLFPTD
RNKTDRSGNILPGTVVDTSICHPTEFDFYLNSHAGIQGTSKPTHYHVLLDENGFSADILQ
VLTNNLCYTYARCTKSVSIVPPAYYAHLAAYRARYYIEDEMSDSGSTGGGRKPKDKVVEV
RPLPSIKDNVKEVMFYV
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgtctggccgaggcggtggtgaacgtggcagtggtcggggtggtggtcgacgtggccgg
gggcagggccgtggtcgcggtcaaccttcgcagtcttcctctcgcggcggcggcggtaga
gcaagaggccgtggatcatctggttctactgcaacttataatccccctcctcctcaaatg
gctccggctcagccacctcctcaaatggctgtagctacgccagttcctccatcgggggcc
cctttttctcatccttcttcaagttctggtgtaggatcactttccagagaggtatcggag
aagcttacaatggagccggtggctgtgactacggcgcctcctcttcctccgtcgtcgtca
aaggcgattaggttccctccaagaccggggttcggcacggtcggtacaaagtgtgtggtt
agggccaaccattttctcgtagatgttgctaatgccgatcttcatcactacgatgttact
ataacgcctgaggtaaccgcaaaaaaggttaacagagcaataatgaagcaacttattgat
gtatacaaagagtcgcatcttggacgtcggtgtccagcttatgatggcaggaagagtttg
tacactgctggtcctcttcccttcgagtcaaaggagcttgttatcaagctacctgaggaa
gatcgcagtgctggttcgtctaggcctgcgcggaaggagcgacaatttaaggttgcaatc
aaattggcctccaagccagaccttcattatctgagggagtttctgagcagaaagcatttt
gaatgccctcaagaagctattcaagttctggatgttgttcttagagctaaaccatctcag
acatatactgaggtgggaaggtcttttttccatacatcattaggtcctagaggagaactt
ggtaatggaatagaatactggtctggatattatcagagtcttcgacccactcagatgggt
ttatctcttaatattgatgtgtctgctcgatcattctatgagccaattttagtttcagag
tttgttgcgaaacatttccgacgatcaaacctgtcaaagccgctgtctgatcaagatcgt
attaaagtgaaaaaggccttgaagggagtaagagttaagctcatctacatggattatgcc
aaaacttgcaagattattggagtatctagagaccctataagccagttgacatttactcat
gatgataagagaacaaatgtctctgtggtcaagtatttccgtgagaaatacaatgttgtg
cttaaatatccatccttgcctgcacttcaaagtggaagcgaagctagacctgtctacctg
ccaatggagctttgtagtatcgttgagggtcaaagatacacaaaaaaactaaatgaacaa
caagttagatctctgctgagagcaacttgtcaacgtccgaacattagggaggggaatatt
acaaagatggtccaggtcaataattttgaggtggaggagcttgttactaaagaatttgga
atgcatgttcgcaaagaacttgcattgattaatgcacgagttctaaatcctccagtgcta
aagtatcacgatagtggacgtgacaaaattgttaatcctagctgtgggcaatggaacatg
atcaacaagaaaatggtcaatgggggtaaagttgatttctggtcttgtgtgaacttctcc
tctgaatataggaatatgtcagaagacttctgtgcggggctggtgaatatgtgtaacagc
aaaggaatggtgtttcgccaaactccttcaattgcaatgcgatcagctcgtgctgatcga
attgatcagactctcatggatgtatacaaagagtctgcaggcttgaataagccacttaag
ttgttgataattatcttacctgatcagactggctcatatggaaaaataaagcgaatttgt
gagacggagctaggtattgtttcacaatgttgtaagcctgcgcaagcttcaaagtttagc
aaccaatattttgaaaatgttgctctcaagatcaatgctaaggttggggggagaaatact
gtgctgaacgatgctgttttaaggagaattccgcttgtgactgatgtccctacaatcatt
tttggggcagatgtcactcatccgccgcctggcgaagactctagttcttctatagctgca
gtcgttgcttcaatggattggcctgaggtaaccaagtatcgtggaattgtctctgcacag
actcaccgggtggaaataatcgaggatctttataaacaaactagggatccacagaagggt
ttagttgagggtggaatggttagggagttgcttcttgctttctacaggtcaacgaaacaa
aagccttctagaattatcttctatagagatggtgttagtgaaggacaattcagccaagtt
ttgctttatgaaatggatgcgattcggaaggcttgttcctcgctacaggaaggatatatg
cctcgggttacatttgttgtggttcaaaagaggcatcatactcgcttattccctactgat
cgcaacaaaactgataggagtggcaacatattaccaggtactgttgtggatactagcatc
tgtcatccaactgagtttgatttttatctcaatagtcatgctggaatccaggggacaagc
aagcccacacattaccacgttttgttggatgaaaatggcttcagtgctgacatcttgcaa
gtgctcacaaacaatttatgttacacgtatgcgaggtgtaccaagtccgtttccatagtt
cctccggcgtactatgctcacctcgctgcttatagggcacgctattatattgaggatgag
atgtcggatagtgggtctactggtggaggccgaaagccgaaagacaaggttgtagaggtt
aggccgctgcccagcataaaggataatgtgaaggaagtgatgttctacgtctga
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integrated database retrieval system
