Gossypium raimondii: 105799123
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Entry
105799123 CDS
T04129
Name
(RefSeq) LOW QUALITY PROTEIN: protein argonaute 5
KO
K11593
eukaryotic translation initiation factor 2C
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105799123
03036 Chromosome and associated proteins [BR:
gra03036
]
105799123
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
105799123
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
105799123
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
105799123
microRNA pathway
RISC loading complex
105799123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoMid
ArgoL2
Piwi_N
Motif
Other DBs
NCBI-GeneID:
105799123
NCBI-ProteinID:
XP_012484978
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Position
9:33207729..33213613
Genome browser
AA seq
931 aa
AA seq
DB search
MSGRGGGGRGSGRGGGRRGRGQDHGRGQPSQSSSRGGGGRARGRGSSGSTATYNPPPPQM
APAQPPPQMAVAPPVPPSGAAFSHPSSSSGVGSLSREVSEKLTMEPVAVTTAPPLPPSLS
KATRPPPRPGFGTVGTKCLVRANHFLIDVANADLYHYDADLHHYDVTIKPEVTSKKLNRA
IMKQLIDVYEESHLGRRCPAYDGRKSLYTAGPLPFESKELVIKLTEEDWRERQFKVAIKL
ASKPDLHYLREFLSGRHFECPQEAIQVLDVVLRAKPSQIYTEVGRSFFHTSLGPRGELGN
GIEYWCGYYQCLRPTQMGLSLIIDASARSFYEPILVSEFVVKHFRLSNLSKPLSDQDRIK
VKKALMGVRVRLICMNYAKTCKIIGVSRDPISQLTFTLDDKRTNVSVVKYFREEYNVVLK
YPSLPALQRGSEARPVYLPMELCSIVEGQRYTKKLNEQQVRSLLRATCQRPNIREGNITK
MLPVNKFGMDVCKELAVIEARVLNPPALXYHDSGRDKIVNPSCGQWNMINKKMVNGGKVD
FWTCVNFSSGYWNMSKGFCAELVKMCNSKGMVFCQTPSIAMPSARADRIDQTLMDVYKES
AGLNKPLQLLIIILPDQTGSYGKIKRICETELGIVSQCCKPVQAAKFSNQYFENVALKIN
AKVGGXNTVLNDAILRRIPLVTDVPTIIFGACVSHPPPGEDSSSSIAAVVASMDWPELTK
YRGVVSAQTDRVEIIQDLYKQTKDPQKGLVEGGMVREMLLAFYRSTKQKPSRIIFYRVVL
VKDNSAKFCFMKWMRFGRLVPRYRKDICLGLHLLWFKRGIILAYSLLIATKLIGVATYYQ
GTSKPTHYHVLLDENGFTADILQVLTNSLCYTYARCTKSVSIVPPAYYAHLAAFRARYYI
EDEMWDSGSTGMEVRPLPSIKDNVKEVMFYV
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtcgaggcggtggtggacgtggcagtggtcggggtggtggtcgacgtggccgg
gggcaggaccatggtcgcggccaaccttcacagtcttcctctcgcggcggcggcggtaga
gcaagaggccgtggatcatctggttctactgcaacttataacccccctcctcctcagatg
gctccggctcagccgcctcctcaaatggctgtagctccgccagttcctccatcgggggct
gctttttctcatccttcttcaagttctggtgtaggatcactttccagagaggtatcggag
aagcttacaatggagccggtggctgtgactacggcgcctcctcttcctccgtcgttgtca
aaggcgactaggccccctccaagaccggggttcggcacggttggtacaaaatgtctggtt
agagccaaccattttctcatagatgttgctaatgccgatctttatcactacgatgccgat
cttcatcactacgatgttactataaagcccgaggtaacctcaaaaaagcttaacagagcc
ataatgaagcaacttattgatgtatacgaagagtcgcatcttggacgtcggtgtccagct
tatgatggcaggaagagtttgtacactgctggtcctcttcccttcgagtcaaaggagctt
gttatcaagctaactgaggaagattggagggagcgacaatttaaggttgcaatcaaactg
gcctccaagccagaccttcattatctgagggagtttttgagcggaaggcattttgaatgc
cctcaagaagctattcaagttctggatgttgttcttagagctaaaccatctcagatatat
actgaggtgggaaggtcttttttccatacatcattaggtcctagaggagaacttggtaat
ggaatagaatactggtgtggatattatcagtgtcttcgacccactcagatgggtttatct
cttattattgatgcgtctgctcgatcattctatgagccaattttagtttcagagtttgtt
gtgaaacatttccggctatcaaacctgtcaaagccgctgtctgatcaagatcgtattaaa
gtgaaaaaggccttgatgggagtaagagttaggctcatctgcatgaattatgccaaaact
tgcaagattattggagtatctagagaccctataagccagttgacatttactcttgatgat
aagagaacaaatgtctctgtggtcaagtatttccgtgaggaatacaatgttgtgcttaaa
tatccatccttgcctgcacttcaaaggggaagtgaagctagacctgtctatctgccaatg
gagctttgtagtatcgttgagggtcaaagatacacaaaaaaactaaatgaacaacaagtt
agatctctgctgagagcaacttgtcaacgtccgaacattagggaggggaatattacaaag
atgctcccggtcaataaatttggaatggatgtttgcaaagaacttgcagtgattgaagca
cgagttctaaatcctccagcgctatagtatcacgatagtggacgtgacaaaattgttaat
cctagttgtgggcaatggaacatgatcaacaagaaaatggtcaatgggggtaaagtcgat
ttctggacttgtgtgaacttctcctcgggttattggaatatgtcaaaaggcttctgtgcg
gagctggtgaaaatgtgtaacagcaaaggaatggtgttttgccaaactccttcaattgca
atgccatcagctcgtgctgatcgaattgatcagactctcatggatgtatacaaagagtct
gcaggcttgaataagccacttcagttgttgataattatcttacctgatcagactggctct
tacggaaaaataaagcgaatttgtgagacggagttaggtattgtttcacaatgttgtaag
cctgtgcaagctgcaaagtttagcaatcaatattttgaaaatgttgctctcaagatcaat
gctaaggttggggggtgaaatactgtgctgaacgatgctattttaaggagaattccgctt
gtaactgatgtccctacaatcatttttggggcatgtgtcagtcatccgccgcctggcgaa
gactctagttcttctatagctgcagtcgttgcttcaatggattggcctgagttaaccaag
tatcgtggagttgtctctgcacagactgaccgggtggaaataatccaggatctttataaa
caaactaaggatccacagaagggtttagttgagggtggaatggttagggaaatgcttctt
gcgttctacaggtcaacgaaacaaaagccttctagaattatcttctatagagtggtgtta
gtgaaggacaattcagccaagttttgctttatgaaatggatgcgattcggaaggcttgtt
cctcgctacaggaaggatatatgcctcgggttacatttgttgtggttcaaaagaggcatc
atactcgcctattccctactgatcgcaacaaaactgataggagtggcaacatattaccag
gggacaagcaagcccacacattaccacgttttgttggatgaaaatggcttcactgctgac
atcttgcaagtgctcacaaacagtttatgttacacgtatgcgaggtgtaccaagtccgtt
tccatagtgcctccggcgtactatgctcacctcgctgcttttagggcacgctattatatt
gaggatgagatgtgggatagtgggtctactggtatggaggttaggccgctccccagcata
aaggataatgtgaaggaagtgatgttctacgtctga
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