Gossypium raimondii: 105799238
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Entry
105799238 CDS
T04129
Name
(RefSeq) ruvB-like protein 1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
gra
Gossypium raimondii
Pathway
gra03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105799238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gra03036
]
105799238
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gra03037
]
105799238
Enzymes [BR:
gra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
105799238
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
105799238
Chromatin remodeling factors
SRCAP complex
105799238
INO80 complex
105799238
INO80 complex (yeast)
105799238
SWR1 complex
105799238
ASTRA complex
105799238
Cilium and associated proteins [BR:
gra03037
]
Motile cilia and associated proteins
Dynein assembly factors
105799238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_22
AAA_16
AAA_5
AAA_18
AAA_19
Mg_chelatase
bpMoxR
AAA_25
Cdc6_lid
DnaB_C
TsaE
AAA_28
AAA_7
AAA_11
IstB_IS21
nSTAND3
NPHP3_N
Zeta_toxin
Rad17
Motif
Other DBs
NCBI-GeneID:
105799238
NCBI-ProteinID:
XP_012485133
UniProt:
A0A0D2SVS1
LinkDB
All DBs
Position
9:34992677..34997587
Genome browser
AA seq
458 aa
AA seq
DB search
MDKMKIEEVQSTAKKQRIATHTHIKGLGLDPTGNAVPLAAGFVGQAEAREAAGLVVDMIR
QKKMAGRALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFR
RAIGLRIKENKEVYEGEVTELSPEETESVTGGYGKSISHVIIGLKTVKGTKQLKLDPTIY
DALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEIVQD
VTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYIDEGVAELVPG
VLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNVRGTDMNSPHGIPVDLLDRL
VIIRTQIYGPSEMIQILAIRAQVEELVVDEESLAFLGEIGQSTSLRHAVQLLSPASIVAK
MNGRDNICKADLEEVSKLYIDAKSSAKILQEQQEKFIS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggataaaatgaagatagaagaggttcaatcaacggccaaaaagcaaagaatcgctact
catactcacatcaaaggccttggtctcgatcccaccgggaatgccgttcctttggctgca
ggttttgtggggcaagcagaggcaagggaagcagctggtcttgtggtggatatgataagg
caaaaaaagatggctggccgtgcacttttgctggctgggcctcccggtactgggaaaaca
gctttggccttaggaatttcccaagagcttgggagcaaggttccattctgtccaatggtt
ggatctgaagtatactcttcagaagtaaagaaaactgaagttttgatggaaaatttccga
cgggctattggtctacgcatcaaggaaaataaagaggtctatgaaggagaggttactgaa
ctctctcctgaagaaacagagagcgtaacaggtggttatggtaaaagcattagccacgta
attattggattgaaaaccgtcaaaggaacaaagcaactgaagttggaccctacaatttat
gatgccttgattaaagaaaaggtagctgttggagatgttatatatattgaagcaaatagt
ggagccgttaaaagggtgggcagaagtgatgcttttgccacagaatttgaccttgaagct
gaagaatatgtgccgcttcccaaaggagaagttcacaaaaagaaggagatagtgcaggat
gtaacattacatgatttggatgctgctaacgcacgacctcaagggggccaagacattttg
tctttaatgggtcagatgatgaagcccaggaagacagaaatcactgacaaattacgacaa
gaaataaataaggttgttaaccggtatattgatgaaggtgtggcagagcttgtcccagga
gttctattcattgatgaggttcatatgctggacatggagtgtttttcatacttgaatcgt
gctttagagagctcactatctccaatagtaatttttgctacaaatagaggaatatgtaac
gtaaggggtactgatatgaatagtcctcatggcatacctgttgacttattggacagattg
gtgatcatccgcacacagatttatggtccttctgaaatgatacagattttagccatccgt
gcacaggtggaagaactggttgtggatgaagaaagtctggcgttccttggagagattgga
caaagcacatctttaaggcatgcagttcaactgttatcacctgctagcattgtggcaaaa
atgaatggtcgagacaacatatgcaaggcggatcttgaggaagtaagcaagctctacata
gatgccaagtcttcggcaaaaattcttcaagagcaacaggaaaaattcatttcatga
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