Gossypium raimondii: 105799243
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Entry
105799243 CDS
T04129
Name
(RefSeq) probable CCR4-associated factor 1 homolog 9
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
gra
Gossypium raimondii
Pathway
gra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105799243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105799243
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105799243
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105799243
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
ScoMcrA_N
Motif
Other DBs
NCBI-GeneID:
105799243
NCBI-ProteinID:
XP_012485138
UniProt:
A0A0D2NQG1
LinkDB
All DBs
Position
9:35030874..35031883
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AA seq
281 aa
AA seq
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MGFEDPDRVSRHIKIREVWSHNLDSEFELISQAIDEYPFISMDTEFPGLVFRPKVDPTRP
YGAQFRPSDHYKVLKSNVDALNLIQVGLTLTDSSGNLPTLGTDDVQFIWEFNFRDFDVDR
DAHAPDSIELLRRQGIDFEKNKEKGIDSLRFAELMMSSGLVCNESVSWVTFHSAYDFGYL
VKILTRRDLPGGLDEFLRVLRVFFGNRVYDVKHMMKFCKSLYGGLDRVARTLDVNRAVGK
CHQAGSDSLLTWHAFQKIRDVYFVNDGPEKHAGVLYGLEIH
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggggtttgaagatccagacagggtttcaagacatataaagataagagaagtttggtct
cataatttagattcggagttcgagttgatcagtcaagcaatcgatgagtaccctttcatc
tccatggacaccgagtttccgggtcttgttttcagacccaaagtggatccaacccggcct
tacggcgcccagttccggccgtccgatcattacaaggttctcaaatccaacgttgatgct
ttgaacttgatccaagtgggcctcaccctcaccgattcttcaggtaatttgcccacccta
ggaaccgacgacgtgcagttcatctgggaattcaatttccgcgactttgacgttgaccgt
gacgctcacgcgcctgattccatcgagctcttgaggaggcaagggattgatttcgagaag
aacaaggaaaaggggattgactcgttacggttcgctgagttgatgatgtcgtctggactc
gtttgtaatgagtcggtgagttgggtgactttccacagcgcgtatgattttgggtacctg
gttaagattctcacgcgccgggacttgcccgggggcttagatgagtttttgagggttctc
agggtgtttttcggaaacagagtttatgatgtgaagcacatgatgaaattctgtaaaagc
ttgtacggtgggttggaccgggtcgctaggaccttggatgtgaaccgggcggttgggaaa
tgtcaccaagccgggtcagattccttgctgacgtggcacgcgtttcagaaaataagggac
gtttattttgtgaacgatggcccggaaaagcatgccggtgtattgtatggattggaaatt
cattaa
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