Gossypium raimondii: 105799502
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Entry
105799502 CDS
T04129
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
gra
Gossypium raimondii
Pathway
gra00040
Pentose and glucuronate interconversions
gra01100
Metabolic pathways
Module
gra_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105799502
Enzymes [BR:
gra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
105799502
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
105799502
NCBI-ProteinID:
XP_052476658
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Position
9:complement(38224035..38226895)
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AA seq
460 aa
AA seq
DB search
MDGQTRQVVVLYFITIFSLFSRYNSLEKDPPPPSYNYFEDLVSAGYDPQAYPSYFTTTID
DGHFKDLISQRTQVISQLQKLGVTSAPSTKTVNVNDFGATGDATQDTQAFEKAWEEACSS
KGEVVLEVPQGQRYQLKPIRFSGPCNSNLTIQIYGSMEASDDMSDYKEDTKHWLIFDSIN
NLLIEGGGTGNINGNGKIWWQNSCKINKTLPCKDAPTALTFYHSKNLKVQNLNIQDAQQI
HVSFEKCNGVQASGLTVAAPESSPNTDGIHVTRTQNIWITNSVIGTGDDCISIVSGSKNV
QAMDITCGPGHGISIGSLGSKSSKAYVSGVTVDGAKLSGTTNGVRIKTWQGGSGSASNIL
FQNIEMNNVSNPIIIDQNYCDQDKPCKEQSSAVQVKDVVYKNINGTSASEVAIKFDCSKT
HPCQEILLQNVKLQEQGDRTAKAICNNVKLTEKGTVFPQC
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggatggacaaactagacaagtagtcgtcctatatttcataaccattttctctttattc
tcacgttacaactccttggaaaaggacccccctcctccctcttataattactttgaagac
cttgtatctgctggatatgatccacaagcctacccttcgtatttcaccaccaccattgat
gatgggcactttaaggatttgatctcacaaaggactcaagttattagccagctccagaag
ttaggtgtcacatcagcaccatcaactaaaacagttaatgtcaatgattttggagccacc
ggtgatgccactcaagacactcaggcatttgagaaggcttgggaagaagcttgttcgtcc
aagggtgaagttgtgcttgaggtgcctcaaggacaacgctatcaactcaagcctattaga
ttttcaggtccctgcaattccaatcttacaatccagatatatggaagcatggaagcatct
gatgatatgtcagactacaaggaagatacaaagcactggcttatctttgatagtattaat
aatctgttaattgaaggtggtggaactggaaatattaatggtaatgggaagatatggtgg
caaaactcttgcaaaatcaataaaactcttccatgcaaggatgcaccaacggctctcacc
ttctaccatagcaaaaacttgaaagttcaaaacttgaacatccaagatgcacaacaaatt
catgtttcttttgaaaaatgcaacggtgttcaagcttctggtcttacggtggcagcccca
gagagcagccccaacaccgatgggattcatgtcactcgtactcaaaacatatggatcaca
aattctgtaataggaacaggtgacgattgtatctccattgtaagtggatccaaaaatgtg
caagccatggacataacttgtggccctggtcatggaatcagtattgggagcttgggatct
aaaagttcaaaggcttatgtctcgggtgtgactgtggatggagctaagctttctggaacc
acaaatggtgtgaggatcaagacatggcagggcgggtcaggaagtgcaagcaacatctta
ttccagaacattgaaatgaataacgtcagcaaccccatcatcatagaccaaaactattgt
gaccaagataaaccatgcaaagaacagagctctgcagttcaagtgaaagatgtggtgtat
aagaacatcaatgggactagtgcttctgaagtagcaatcaaatttgattgcagcaagact
catccttgccaagaaattttgctgcaaaatgttaagttacaggaacaaggagatagaact
gccaaagctatctgcaacaatgttaaattgactgaaaagggaactgttttcccacaatgt
taa
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