Gossypium raimondii: 105799600
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Entry
105799600 CDS
T04129
Name
(RefSeq) E3 ubiquitin-protein ligase RHF2A isoform X1
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105799600
Enzymes [BR:
gra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105799600
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105799600
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
RING_XB3-XBAT31
zf-HC5HC2H
zf-Nse
zf-C3HC4_3
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
105799600
NCBI-ProteinID:
XP_012485698
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All DBs
Position
9:39435744..39440581
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AA seq
376 aa
AA seq
DB search
MKVLRMETQKLDSHMQSAAAFVQGGILDANDDSCSICLEEFSASDPSTVTNCKHEFHLQC
ILEWCQRSSQCPMCWQAISLKDPASQELLQAVETERSIRVTAPRNTAIFHHPALGGFELQ
HLPVGVNDPELEERIIQHLAAAAAMGRTHHAGRREGQRRSAHSHQHFLVFSHPSTQHPGS
GSSAQTQTAGESEAPAITVARPSGPLSSRDEASPFPSSQNTSASGSTVSPVNRRGFSFNN
RSTSSNSSLPNQEGAGPSEFQSFSESIKSRLNAVSWRYRESISKSTRGWKERLFSRSSSM
SDIGNEVRREVSAGIASVSRMMERLEINGNSRENQAASLSQHLSESSVTEQDNQRNTGPR
GIIPSRPPHATSSLSR
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttctgagaatggagacgcagaagctagacagtcatatgcaatcagctgcagct
tttgtgcaagggggaatcctggatgccaatgacgattcttgtagcatatgccttgaggag
ttttctgctagtgatccttctacggtgaccaattgtaagcatgagtttcacctccaatgt
attcttgaatggtgccagagaagctcacaatgtccaatgtgctggcaagccattagcttg
aaggaccctgcaagtcaagaattgcttcaagcagtagaaacggaaaggagcattagggtt
actgcaccaagaaatactgccatatttcaccatcccgcccttggtggttttgaattgcaa
catttgccggttggtgtaaatgaccctgaacttgaagagcgtataattcagcacttggct
gctgctgctgcaatgggaaggacccaccacgctggtaggagggagggccagagaagatct
gctcatagtcaccagcacttcttggtgttttctcatcctagcacacagcaccctggttct
ggatcatcagctcagacacagacagcaggagaatctgaagcacctgcaatcaccgtagcc
aggccatccggtccactatcatctagagatgaggcttctccttttccatctagtcagaat
acatcagcttctggatctaccgtcagtcctgtgaatagacgaggattttcctttaataat
cgaagcacttctagtaattcctcattgccaaatcaagagggagcaggaccatcagagttt
cagtcattttcggagtctataaaatccagacttaatgcagtgtcctggagatatagggag
tcaatttcaaagagtacaagaggctggaaggagaggttgttctcacgtagttcttctatg
tctgatatcgggaatgaagttcgtcgagaagtgagtgcaggaatagctagtgtatctcgt
atgatggagcgtcttgaaatcaatggaaatagcagagaaaaccaagctgcttctctgtca
caacatttgtctgaatcttctgttacagagcaagacaatcagcgtaatacagggccacgt
ggcattatcccttcacgacctccgcatgccactagttctctttctagataa
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