Gossypium raimondii: 105799794
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Entry
105799794 CDS
T04129
Name
(RefSeq) zinc finger protein JACKDAW
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gra03000
]
105799794
Transcription factors [BR:
gra03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
105799794
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_STOP2_C
zf-C2H2_jaz
zf-met
zf-C2H2_4
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
105799794
NCBI-ProteinID:
XP_012485978
UniProt:
A0A0D2SZ97
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Position
9:complement(41573369..41576254)
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AA seq
452 aa
AA seq
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MSGEAFSLPAASIGGFIQDPSNANPNPKPNANPAKKKRNLPGTPDPDAEVIALSPKTLMA
TNRFICEICKKGFQRDQNLQLHRRGHNLPWKLRQRTNKEVRKKVYICPEKTCVHHDPSRA
LGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYKCDCGTLFSRKDS
FITHRAFCDALAEESARLTSVAATSLNFRNDTVNLPHGFAGRGVQDVAGIPQFGSGFPQD
FSGMPAPGLPEMVQMAPANVFGSSSHFPGFENGGATSSNSNNLSLSQLPQGLKEEGRNEG
NLMESLSSLYSDNQNKQSKANASPMSATALLQKAAQMGSTRSNSSFFGNSFGVMSSSSSH
TAPTFMASSSASMSATSNKLDKLMLQTGGKPSEPTLLSMHHPGSNSFAQSLTRDFLGMSN
DQSPRPFLPQELAKYAAIGSTMGLSQFTSSNH
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtgaggcgttttctttaccagctgcttcaataggagggtttattcaagaccca
agtaatgcaaaccctaaccctaaacctaatgctaaccctgctaagaagaagagaaatctt
cccggaactcctgatccagatgctgaagtaattgctttatctccaaaaacacttatggct
acaaaccgattcatatgtgaaatatgcaagaaaggtttccaaagagaccaaaacctgcag
cttcaccgcaggggtcacaatcttccatggaagctaaggcaaagaacaaacaaagaagtt
cggaagaaggtttatatttgccctgagaaaacctgcgtccaccatgatccatccagggct
cttggcgacctcactggaataaagaaacatttcagcagaaaacatggtgagaagaagtgg
aagtgtgagaaatgttcaaagaaatacgctgttcaatccgactggaaagctcactctaaa
acttgtggtactagagagtacaagtgtgactgtgggacactgttttccagaaaagacagc
tttatcacccatagagctttttgtgacgccttagctgaagaaagtgcaagactcacttca
gttgcagccacaagcctaaatttcagaaacgatactgtgaatctgcctcatggatttgct
ggccgtggagttcaagatgttgctggcattcctcaatttggttcgggttttcctcaagat
ttcagtgggatgcctgcaccaggtttgcctgagatggttcaaatggctccagccaatgtc
tttggctcttcttcacactttcctggatttgaaaacggcggtgcaacttcatcaaattcc
aataatctctccttatcgcaactgccacaagggttaaaagaagaaggtcgaaacgaagga
aatttaatggaaagcctttcatctctctattctgataatcaaaacaagcaatctaaagct
aatgcttcaccaatgtccgcaactgcgcttttgcaaaaagcggctcaaatgggttcaact
agaagcaattcgtccttctttggcaacagtttcggtgtaatgagctcatcttcctctcac
acagcacctactttcatggcatcaagcagtgcatcaatgagtgcaacaagcaacaagctt
gataagctcatgttacaaacaggaggcaaaccaagtgagccgactctattaagcatgcat
caccctggttcaaattcattcgctcaaagcttgacgagggacttccttgggatgagcaat
gatcaatcaccacgtccatttttaccccaagaactagccaaatatgcagcaattggctca
accatgggtctcagtcaattcactagcagcaaccactaa
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