Gossypium raimondii: 105799844
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Entry
105799844 CDS
T04129
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gra03016
]
105799844
Enzymes [BR:
gra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
105799844
Transfer RNA biogenesis [BR:
gra03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
105799844
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Gene cluster
GFIT
Motif
Pfam:
RNB
WHD_RNase_II
CSD_RNase_II
HTH_RNase_II
Rhabdo_matrix
Motif
Other DBs
NCBI-GeneID:
105799844
NCBI-ProteinID:
XP_012486070
UniProt:
A0A0D2RXT3
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Position
9:41998598..42003909
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AA seq
793 aa
AA seq
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MMAVRAVNGGSLFRSAASPPLLTFGCRFRQFSSLPFRRNSELGLRFPIFCCGNQFLGYGG
GLSRSVHSIVDCVMEELTAWRSRRRIRATVKLTTSGELLEDKLVNQEIEKGLLLEFKKDS
DRVLLGVAQRPDGKKNWMVYDQNGVTSSIKPQQITYIVPGVENFDHAEISKFLQKAQENL
DPTLLEIAWVELLEKNASVTAEELAEMIFGSSEPLESYCAHLLLSKDEVYFTVLATKGSR
TIYGPRPTGQVEELLHKKLAKDASEKELQDFVQLLVSAKAKATLAKPSKSSWIMDEKIQY
KIESLEAYAIDACKSDEQRKTAGMILKAMGLTKTASSALNLLINIGYFPVHVNLDLLKLN
ILTDHSDEIIAAAESLLSDSSDSDEMNREDLTHLKVYAIDVDEADELDDALSATKLQDGR
MKIWIHVADPTRYVEPGSMVDREALRRGTSVFLPTGTYPMFPEKLAMEGMSLKQGELCNA
VSVSVILHSDGSIAEYSVQNSIIKPTYMLTYESATELLHLNLEEEAELKILSEAAALRLK
WRRQQGAIDTSTLEARIKVVNPEDLEPSINLYVENQADPAMRLVSEMMILCGEVVATFGS
RNNIPLPYRGQPQSNIDVSAYSHLPEGPVRSSAIVRIMRAAEIDFRKPIRHGVLGLPGYV
QFTSPIRRYLDLLAHYQVKAFLRGESPPFSAGQLEGMASIVNMQVRVVRKLSASSLRYWI
IEFLRRQPREKKFRALILRFIKDRIAALLLVEVGLQASAWVSIGSQVGDEVEVQVEEAHP
RDDVLYLKEVLRN
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgttcgcgccgtcaacggtggttctttgtttcgttccgccgcttcgcctcct
ctgttgacgtttggctgccgtttccgccaattcagctccttaccgtttcgccgaaactct
gagttagggcttcgatttcctattttttgttgcgggaatcagtttctaggatatggcggt
ggcctttcgcgctcggttcatagtatcgttgattgcgtcatggaagagctaacagcttgg
cgcagtcgcagaagaattcgcgccactgtcaagctaacgactagtggtgagcttcttgaa
gataagcttgtcaatcaagaaatagaaaagggattgctgctggagtttaagaaggattca
gatagggtattgctcggagttgctcagagacctgatggaaagaagaactggatggtgtac
gatcagaatggtgtcacatcatctatcaaaccacaacaaattacatatattgttccaggt
gtagaaaattttgatcatgctgagatctcaaaatttctccaaaaagctcaggaaaacttg
gacccaacattgcttgagattgcttgggttgagcttcttgaaaagaatgcgtcagtgaca
gctgaagaattggccgagatgatatttggtagttcagagcctcttgagagctattgtgcc
catcttttgctatcaaaagatgaagtatacttcactgtgctggcaacaaaaggttctcgt
accatttatgggcctcgaccgacaggacaagtggaagaacttttacacaagaagcttgcc
aaggatgcctctgagaaagaacttcaggacttcgtacaattacttgtctctgctaaagca
aaggctacactcgctaaaccttccaaatcttcctggattatggatgagaaaatccaatac
aaaattgaatcccttgaagcatatgccattgatgcctgcaaaagtgatgagcaaaggaaa
actgctggaatgatcctgaaggcaatgggactaacaaaaacagcatcctctgcactaaac
cttctcataaacattggttattttcctgtgcatgtcaatctcgatctgttaaagttaaat
attcttacagatcattctgatgagattatagctgctgctgaaagtcttctgtctgattca
tctgactcagatgagatgaacagagaggatcttactcatttgaaggtctatgctattgat
gttgatgaggctgatgagcttgatgacgccttaagtgcaacaaagttgcaagatggccgc
atgaaaatatggatacatgttgcagatccaactagatatgttgaacctgggagcatggta
gacagggaagcactgagaagaggaacctctgttttcttgccgactggcacttatcctatg
tttcccgagaaacttgctatggagggaatgagtttgaaacaaggagaactttgcaatgcg
gtcagtgtttctgttatcctgcactctgatggcagcattgcagagtattcagttcaaaac
tcgattattaaaccaacttatatgctgacctatgagagtgcaactgagctgcttcatttg
aacctggaagaggaggctgaactgaagattctatctgaagcagctgctctaaggttaaaa
tggcgtcgccagcagggtgcaattgatacatccaccctagaagctcgcattaaagtagtt
aacccagaagaccttgaaccatcaattaatctttatgttgaaaaccaagcagaccctgca
atgcggcttgtttctgagatgatgatactttgtggagaagttgtagccacatttggatct
cgcaataacatccctttaccctatagaggacaaccacagtcaaatattgatgtttctgca
tattcacatcttcctgaagggccagttcgaagctctgccattgttagaataatgcgtgca
gctgaaattgatttcaggaagcctattcgtcatggggttcttggacttcccggttatgtt
cagtttacatcacccatccgtagatatttagatcttcttgctcactatcaggtgaaggca
tttcttagaggtgaatctccacctttttcagctggtcaactagaagggatggcatcaata
gtaaatatgcaagttagagtagtaagaaagctctcagccagcagtctccggtattggata
atagagtttctgagaaggcagccaagggagaaaaaatttcgtgcattgatccttagattc
atcaaggacaggattgcagccttattacttgttgaggtgggacttcaggcatctgcatgg
gtgtctataggatctcaggtaggagatgaagtagaagttcaagttgaagaagcgcatcct
cgcgatgatgttctttaccttaaggaggttctaagaaactga
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