Gossypium raimondii: 105799947
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Entry
105799947 CDS
T04129
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
gra
Gossypium raimondii
Pathway
gra00040
Pentose and glucuronate interconversions
gra01100
Metabolic pathways
Module
gra_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105799947
Enzymes [BR:
gra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
105799947
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
105799947
NCBI-ProteinID:
XP_012486225
UniProt:
A0A0D2NBK5
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Position
7:complement(19111777..19113254)
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AA seq
400 aa
AA seq
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MNIAITALLLLFTLIPIVECTDIDVVAKFGAVADGQTDLSLPLMNAWKEACASPEPVNIV
IPEGTYLLSEATLNGPCQAPISLQLQGTLMAPEDPTVFKEPTWVSISYVDSLTMFGGGVF
DGQGATAWGQNDCSKNKNCVKLPINIRFHNVKNSLIQDITTKDSKQFHVNVLGCSNITFQ
SFTVSAPEESLNTDGIHIGRSDGVYILDSKIETGDDCVSLGDGSNNVKVQGVTCGPGHGI
SIGSLGKYKNEEPISGVFVTQCTLANTMNGVRIKTWPASQPGSATDIHFEDITMDNVGNP
ILVDQEYCPWNQCDLSVPSRVQLSKLSFKNIRGTSKTQIAVKLICSSGLPCDEVELADID
LTYNGPEGPAISQCSNVHPALSGVQNPAACSSQPTGEAAP
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaatattgcaattacagcattgctacttttgtttactttaatccctatagttgaatgt
actgatattgatgtggttgccaagtttggggcagtagccgatggacaaacggacttgagc
ctacccttgatgaatgcttggaaagaagcctgtgcatcgccagaacccgttaacattgtg
attcccgaagggacctacttattaagtgaagccaccttgaatggcccttgccaagctcct
atctcgcttcagcttcagggcaccctcatggctcctgaagatcctactgtttttaaggaa
ccaacttgggtttccatctcctatgtcgatagcctaacaatgttcggcggtggggttttc
gatggccaaggagccactgcttggggccaaaacgactgctctaagaacaaaaactgcgta
aaacttcccattaatattagatttcataatgtcaagaattcactcatacaagacataacc
accaaagacagcaagcaattccacgttaatgttctaggatgctctaacattacgtttcaa
agtttcaccgtctctgcacccgaagaaagcctaaacacggacggaattcacatcggacga
tcagatggggtctacattctcgactcaaagattgaaactggtgatgactgcgtctccctg
ggtgatggtagcaacaatgtgaaagtccagggagtaacttgtggaccaggtcatggcatc
agtataggaagtctcggaaaatacaaaaacgaagaaccgatatcaggagtttttgtcacg
caatgcaccttggctaatactatgaatggtgtgaggatcaaaacttggccggcctctcaa
cctggctcagcaacggatatacatttcgaggatattaccatggataacgtcggaaatccc
atcctggttgatcaagaatattgcccatggaaccaatgcgatctatcggttccatcgcgt
gttcaactcagcaaacttagcttcaagaatattcgaggcacttctaaaactcagatagcc
gtgaagcttatttgcagcagcggtttgccatgtgatgaagtggagttggccgacatcgac
cttacttacaatggacccgaaggacctgcgatatctcaatgttcaaacgtgcatcccgca
ctttccggcgtgcagaacccagctgcatgttcaagccaacctaccggagaagctgctcct
taa
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