Gossypium raimondii: 105800070
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Entry
105800070 CDS
T04129
Name
(RefSeq) cyclin-dependent kinase D-3
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
gra
Gossypium raimondii
Pathway
gra03022
Basal transcription factors
gra03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105800070
09124 Replication and repair
03420 Nucleotide excision repair
105800070
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gra01001
]
105800070
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gra03021
]
105800070
03019 Messenger RNA biogenesis [BR:
gra03019
]
105800070
03400 DNA repair and recombination proteins [BR:
gra03400
]
105800070
Enzymes [BR:
gra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
105800070
2.7.11.23 [RNA-polymerase]-subunit kinase
105800070
Protein kinases [BR:
gra01001
]
Serine/threonine kinases: CMGC group
CDK family
105800070
Transcription machinery [BR:
gra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
105800070
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
105800070
DNA repair and recombination proteins [BR:
gra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
105800070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Haspin_kinase
Seadorna_VP7
Motif
Other DBs
NCBI-GeneID:
105800070
NCBI-ProteinID:
XP_012486417
UniProt:
A0A0D2S651
LinkDB
All DBs
Position
9:43911118..43919561
Genome browser
AA seq
410 aa
AA seq
DB search
MDPSKKVADRYLKREILGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIK
LLKELKDPNIIALIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSYTQMTLKG
LAFCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARIFGSPDRKFTHQVFARWYRAPELL
FGTKQYGAGVDVWAAACIFAELLLRRPFLQGTSDIDQLGKIFAAFGTPTPSQWPDMVYLP
DYVEYQYVPAPPLRSLFPMASDDALDLLSKMFTYDPKARITVQQALEHRYFSSAPLPTDP
AKLPRPTPKSRPSDFNPQEGPTVLSPPRKSRRVMPDRDRFEGNSNLLEKIDDHVGEARLA
VGDHAGKSDQVPMSVDFSIFGSKPLSRPTINSADRSHLKRKLDLEFQHND
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggatccgtcgaagaaagtggcggataggtatttgaagcgcgagattcttggtgaaggt
acttacggtgttgtctacaaagccattgatactaagacgggacagactgttgcaattaag
aaaattcggctggggaagcaaaaggaaggggtgaattttactgcactcagagaaattaaa
cttcttaaggagcttaaagatccaaatataattgctttaatagatgcattcccacacaag
ggtaatttgcatcttgtgttcgagttcatggagactgaccttgaagctgttattcgagat
cgtaatatattcctctcaccagctgatatcaaatcctacactcagatgactttgaaaggg
cttgctttttgccacaagaaatgggttttacacagggatatgaagccgaataatttgcta
ataggatccaatggacaacttaaacttgcagattttggtttagcacgcatatttggcagc
ccggatcgtaagtttactcaccaggtctttgctcgatggtacagagctcctgagttactt
ttcggtaccaagcaatatggtgctggtgtggatgtttgggcagctgcctgtatatttgct
gaacttctcctccgtcgaccatttctgcagggtacaagtgacatcgatcagttaggaaag
atctttgcagcttttgggacaccaacgccctctcagtggccagatatggtatacctgcct
gattatgtagaataccaatatgttcctgcaccacctttgcgttcattgtttccaatggcc
agtgatgatgctttagatcttttatcaaagatgtttacttatgacccaaaagctaggatt
acggtgcagcaagcattagagcacaggtatttttcatctgctcctctacctacagatcca
gctaagctccctaggcctacccctaaatctcgtccgtcagattttaatccccaggaaggt
cccactgtgctttctcccccacgaaaatctaggagagtaatgccagatcgtgacagattt
gaaggtaattccaacctattggagaagattgatgaccatgttggtgaagcaagactggca
gttggtgaccatgcaggaaagagtgaccaggtgccaatgtcagtagatttttcaatcttt
gggtcgaaacctctcagtagaccgacaattaacagtgctgacagatctcatctgaagagg
aaacttgatcttgaattccaacacaatgattaa
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